Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  271 bits (694), Expect = 2e-77
 Identities = 164/423 (38%), Positives = 243/423 (57%), Gaps = 19/423 (4%)

Query: 13  ALQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLPA 72
           ++ FS   LD RLL +L  +GI  PT IQ Q+IP  L G+D++A ++TG+GKT AF LP 
Sbjct: 5   SITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPL 64

Query: 73  MQRVIAT---KALSKRDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFNDQ 129
           +QR I     +  + ++ R L+L+PTRELA QV   L+     T+ K + + GG +   Q
Sbjct: 65  IQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQ 124

Query: 130 AKALARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQAAD 189
              L      ++ATPGRL DH   + L+L  +E+L+LDEADRMLD+GF   L+ + +   
Sbjct: 125 LNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLS 184

Query: 190 HKRRQTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKEQL 249
              RQTL FSAT D  +I  +A  ++++P  V +  S+   + + Q +Y  D    K +L
Sbjct: 185 -PLRQTLFFSATFD-SKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDK-KRKREL 241

Query: 250 LTRLLQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQ 309
           L+ L+  +  +QV++FT TR  +D LA  L   G    S++G+  Q AR + +D F  G+
Sbjct: 242 LSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGK 301

Query: 310 QQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKDWV 369
            + L+ TDVA+RGLD+  +  V+N+DMP  AE+Y+HRIGRTGRAG  G A+SL+   +  
Sbjct: 302 VRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQP 361

Query: 370 NFKQVQNFLR--------KSFEFSEL--EELAPKFKGLKDKPSQEKRLGKQQAKPKAKTA 419
             + ++  L         K FE S +  EE +P+    +   S EKR  K Q K  A+  
Sbjct: 362 QLEAIERLLNTRLPQEWLKGFEPSPVVHEENSPRRSAGR---SSEKRKLKAQLKIHAQRG 418

Query: 420 KAA 422
           K A
Sbjct: 419 KKA 421