Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  495 bits (1275), Expect = e-144
 Identities = 260/448 (58%), Positives = 316/448 (70%), Gaps = 6/448 (1%)

Query: 12  TALQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLP 71
           + LQF D  LD RLL +L H      TEIQ Q+IP+ ++GRDL+ASSKTGSGKTLAF+LP
Sbjct: 3   STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLP 62

Query: 72  AMQRVIATKALSKRDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFNDQAK 131
            + + + TKA S +DPR LIL+PTRELA QVY +LR ++    Y A  I GGENFNDQ K
Sbjct: 63  MLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122

Query: 132 ALARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQAADHK 191
           ALAR P F+VATPGRLADHL  R L+L GLE L+LDEADRMLDLGFA++LR I+ AA H+
Sbjct: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182

Query: 192 RRQTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKEQLLT 251
           RRQTLMFSATLDH  +N++A ELL EP+ +AIG    E++DI Q  YLCD+L HKE LL 
Sbjct: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242

Query: 252 RLLQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQQQ 311
           R+L    ++QVIIFTATR DTDRL   L +      +LSG L Q  RN IM QF R   +
Sbjct: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302

Query: 312 ILVTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKDWVNF 371
           ILVTTDVASRGLD+  V+ VINFDMPK  EEY+HR+GRTGRAG KGDA+SLVGPKDW +F
Sbjct: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362

Query: 372 KQVQNFLRKSFEFSELEELAPKFKGLKDKPSQEKRLGKQQAKPKAKTAKAASSTKPTKPR 431
           K+V+ FL++  +F  L  L  KFKGLK + ++ K    Q    +   AKA S +K   PR
Sbjct: 363 KRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQ----RVNKAKAPSKSKKAAPR 418

Query: 432 DKRFITGVDVGDAPMLRKPKAKLQDTPE 459
           DK F   V VGD+  +  PK K+   PE
Sbjct: 419 DKSFYQNVAVGDSVFI--PKKKVAPKPE 444