Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 626 a.a., DEAD/DEAH box helicase from Pseudomonas sp. BP01

 Score =  270 bits (690), Expect = 1e-76
 Identities = 165/464 (35%), Positives = 248/464 (53%), Gaps = 37/464 (7%)

Query: 14  LQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLPAM 73
           + F+   L + L+ ++E  G   PT +Q ++IP  L GRDLM +++TG+GKT  F LP +
Sbjct: 1   MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 74  QRVIATKALSK------RDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFN 127
           +R+       K      R PRVL+L PTRELA QV+   ++   +    +  I GG   N
Sbjct: 61  ERLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMN 120

Query: 128 DQAKALARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQA 187
            Q +A+A+    +VA PGRL D   Q  + L  +E+L+LDEADRMLD+GF   ++ +   
Sbjct: 121 PQVQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLAR 180

Query: 188 ADHKRRQTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKE 247
              KR Q L+FSAT     I ++A +LL  PE + +   +   + I Q++Y     SHK 
Sbjct: 181 LPSKR-QNLLFSATFSK-DITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLP-ASHKR 237

Query: 248 QLLTRLLQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSR 307
            LL  L+ L   +QV++FT T+   +RLA  L +QG + +++ G   Q AR + +  F  
Sbjct: 238 ALLAHLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKA 297

Query: 308 GQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKD 367
              ++LV TD+A+RGLD+  +  V+NF++P   E+Y+HRIGRTGRAG  G+AISLV P +
Sbjct: 298 NSVRVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDE 357

Query: 368 WVNFKQVQNFLRK--------SFEFSELEELAPKFKGLKDKPSQEKRLGKQQ-------- 411
               K ++   R+         F+ S++E   P+   ++++P    R G+ Q        
Sbjct: 358 EKLLKSIERVTRQKIADGDLMGFDASQVEAEKPE---VRERPQANGRGGRNQPRGEGGKD 414

Query: 412 ----AKPKAKTAKAASSTKPTKPRDKRFITGVDVGDAPMLRKPK 451
                K K K    A      KP DK        GD P  RKP+
Sbjct: 415 ANGGRKDKGKDKGKAKQPAAAKPADKE-----KSGDKPQQRKPR 453