Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 449 a.a., ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  673 bits (1737), Expect = 0.0
 Identities = 342/447 (76%), Positives = 389/447 (87%)

Query: 14  LQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLPAM 73
           +QF+DFSLD+RLL SL+HMGI TPT IQ Q++P+ L+G+DLMASSKTGSGKTLAFLLPA+
Sbjct: 1   MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAL 60

Query: 74  QRVIATKALSKRDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFNDQAKAL 133
           QRVI+T+ALSKRDPRVLILLPTRELA QVYSQLRLLVANTQYKAI +LGGENFNDQAKAL
Sbjct: 61  QRVISTRALSKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL 120

Query: 134 ARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQAADHKRR 193
           A++PHF+VATPGR+ADHL Q++L+LNGLELLILDEADRMLDLGFA QL+AIN+AADHKRR
Sbjct: 121 AKEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADHKRR 180

Query: 194 QTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKEQLLTRL 253
           QTLMFSATLDH +INEIAA LLK P HVAIG +H E+QDI+Q+IYLCD+L HKE LL+RL
Sbjct: 181 QTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRIYLCDHLDHKEALLSRL 240

Query: 254 LQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQQQIL 313
           L  E HKQVIIFTATR DT+RLA  L+ QGF+T++LSGELKQAARNQIMDQF+RGQQQIL
Sbjct: 241 LSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQQQIL 300

Query: 314 VTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKDWVNFKQ 373
           VTTDVASRGLDLLNVSLVINFDMPKFAEEY+HRIGRTGRAGAKGDAISLVGPKDW +FK+
Sbjct: 301 VTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDSFKK 360

Query: 374 VQNFLRKSFEFSELEELAPKFKGLKDKPSQEKRLGKQQAKPKAKTAKAASSTKPTKPRDK 433
           VQ FLRK+FE S ++ L  KF GLKDKP      G  +A  K K+    +  K    RDK
Sbjct: 361 VQLFLRKTFEISVIKGLEAKFTGLKDKPKSVATKGVVKANTKGKSKPKPNVVKAAPSRDK 420

Query: 434 RFITGVDVGDAPMLRKPKAKLQDTPED 460
           RFITGVDVGDAPM +KPKA+L    +D
Sbjct: 421 RFITGVDVGDAPMRKKPKAQLLQESDD 447