Pairwise Alignments

Query, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 443 a.a., ATP-dependent RNA helicase SrmB from Klebsiella michiganensis M5al

 Score =  295 bits (755), Expect = 2e-84
 Identities = 179/448 (39%), Positives = 253/448 (56%), Gaps = 11/448 (2%)

Query: 12  TALQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLP 71
           T   FS+  LD+ LL +L+  G   PT IQ  +IP  L GRD++ S+ TG+GKT A+LLP
Sbjct: 2   TVTTFSELELDENLLDALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLLP 61

Query: 72  AMQRVIATKALSKRDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFNDQAK 131
           A+Q ++         PR+LIL PTRELA QV    R L  +T      I GG  + + A+
Sbjct: 62  ALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAE 121

Query: 132 ALARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQAADHK 191
             + +   VVAT GRL  ++ + +     +E LILDEADRMLD+GFA+ +  I       
Sbjct: 122 VFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHI-AGETRW 180

Query: 192 RRQTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKEQLLT 251
           R+QT++FSATL+   I + A  LL+EP  V+   S  E + I Q  Y  D++ HK  LL 
Sbjct: 181 RKQTMLFSATLEGDAIKDFAERLLEEPAEVSATPSTRERKKIHQWYYRADDIKHKTALLV 240

Query: 252 RLLQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQQQ 311
            LL+     + I+F   R     LAG L E G +T  L GE+ QA RN+ + + + G+  
Sbjct: 241 HLLKQPEATRSIVFVRKRERVHELAGWLREAGINTCWLEGEMVQAKRNEAISRLTDGRIN 300

Query: 312 ILVTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKDWVNF 371
           +L+ TD+A+RG+D+ +VS V NFD+P+ A+ Y+HRIGRTGRAG KG AISLV   D +  
Sbjct: 301 VLIATDIAARGIDIADVSHVFNFDLPRTADIYLHRIGRTGRAGKKGTAISLVEAHDHLLL 360

Query: 372 KQVQNFLRKSFEFSELEELAPKFKGLKDKPSQEKRLGKQQAKPKAKTAKAASSTKPTKPR 431
            ++  ++ +  +   ++EL P  +     PS EK+ GK   K  AK A+     K  KPR
Sbjct: 361 GKIGRYIEEPLKARVIDELRPTTRA----PS-EKQTGKPSKKVLAKRAEKKEKEK-EKPR 414

Query: 432 DKRFITGVDVGDAPMLRKPKAKLQDTPE 459
            K+     D  +    RKP A   DTP+
Sbjct: 415 VKK--RHRDTKNIGKRRKPSA--ADTPQ 438