Pairwise Alignments

Query, 1084 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

Subject, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  246 bits (628), Expect = 6e-69
 Identities = 253/1072 (23%), Positives = 479/1072 (44%), Gaps = 93/1072 (8%)

Query: 25   AMFQLSAITPLLALLGLLL--GLFAVMVTPKEEEPQIDVTFADIYIPFPGATPSEVEHLV 82
            A + L+  T +  L+ L L  G  + +   + E+P+  +  A I  P+PGAT  EV   V
Sbjct: 4    ARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVSDEV 63

Query: 83   TQPMEEVISQIKGIDTLYSFSQPDGALIIAIFEVGIPRNEAIVKLYNQVYSNKDKVASQA 142
            T  +E  +  ++ +  + S S    + +    ++   ++ A ++   QV+   DK+  + 
Sbjct: 64   TDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQ---QVW---DKLRRKV 117

Query: 143  GVGEPQIKPRG------IDDVPIVSLTLWSKDKAQSAEQLTHIAKGLESELKRIPGTREI 196
               + Q+ P         D   + +L      +  S +QL      L  EL  +PG  + 
Sbjct: 118  ADAQRQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKA 177

Query: 197  YSVGSHEISLNVRIDPAKMSFYGLTYDDINRSLSSNNHVSMPVSLVQDNQEIKVQTGQFL 256
             ++   + ++ + +   +M+ +GL+ + + + L   + V++  S+      I V     +
Sbjct: 178  ATLAEQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNI 237

Query: 257  KSKQEVEQLVVAVYQDESGQSAPVYLGDIAKISLNSDIPTQHA--WHGDKSAIYPAVTIA 314
             S  ++  L VAV       +A V LGDIA IS     P      ++G +     A+   
Sbjct: 238  SSLADLTNLQVAV----GSNNAVVRLGDIANISRGYTEPASMLMRYNGQR-----AIGFG 288

Query: 315  IGKQPGENAVDIANVILERLDKIDNILVPDDVNITVSRNYGKTAGDKANTLILKLVFATS 374
            I    G N V++ + +  RL ++++   P  +++ V      +        I  L+ A +
Sbjct: 289  ISNVTGGNVVEMGDAVKARLAELESQR-PLGMDLHVISMQSDSVRASVANFIDNLIAAVA 347

Query: 375  AVVILVFLTMGLRESVVVGIAIIITLAITLFASWAWGFTLNRISLFALIFSIGILVDDAI 434
             V +++ L MG+R  V++G  +++T+A TL         + RISL ALI ++G+LVD+AI
Sbjct: 348  IVFVVLLLFMGVRSGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAI 407

Query: 435  VVVENIH-RHMALGKRSFVELIPVAVDEVGGPTILATFTVIAALMPMAFVSGLMGPYMSP 493
            VV + +  R          +++   V+    P +  T   I A   +      MG Y   
Sbjct: 408  VVTDGVLVRFQQEPNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGS 467

Query: 494  IPINASMGMLISLAIAFIVTPWLATKLLKGHQHQGGDGEHDVDDRMLRLFTRLISPFVRG 553
            +       M +S   A  VTP L    L+           +     L    + +  +V  
Sbjct: 468  LFWVILYSMFLSWVFAVTVTPMLCHDFLRVKAPT-----KEAKPSKLVTGYKAVLQWVLS 522

Query: 554  KQAGKARIGLGAAIALLIMIAVSLPVGQLVVLKMLPFDNKSEFQVMLDMPEGTPVEQTQR 613
             +     + LG  +A  +  A  +P G       +P   + +F V + +P+G+ + +T++
Sbjct: 523  HRVVSCAMLLGTLVAA-VWGAQFIPPG------FMPESQRPQFVVDVYLPQGSDIRRTEQ 575

Query: 614  VLKALAMELDKVEEVDNYQLYAGTAAPMNFNGLVRHYFLRQSQELGDIQVN--LVDKGDR 671
            V+ ++  ++ + + + N   + G        GL   + L  S E  +      L+D  D 
Sbjct: 576  VVASIEKDVTQKDGITNITSFIGGG------GL--RFMLTYSPEARNPSYGQLLIDIDDY 627

Query: 672  DRDSHSIASEVRRALQATAKQYHANVKVVEVPPGPPVWSPILAEVYGPNAEMRETAANAL 731
             + +  +  E++  L A  K   A++KV +   G      I A   GP++ +       L
Sbjct: 628  TKIA-PLVGELQNELDA--KYPDASIKVWKFMLGRGGGKKIEAGFKGPDSHV-------L 677

Query: 732  QQLFHDTQDVVDIDIYLPAAQQKWQVNI-------DRAKASLMGVPYSNIVDLVATSVGG 784
            +QL    + ++  D  L A Q  W+  +          +A  +G+    I   +A ++ G
Sbjct: 678  RQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVYSAQEAQRLGLTTQEISAAIAQTLNG 737

Query: 785  KAVSYLHKPNQKSPVPIKLQLEEGAKVDLEQVLNLRLTNA-SGNSVPVSELI----TIHK 839
            + V    + N    +P+ ++  E  +     + N  + +A +G  +PVS+L+    T+++
Sbjct: 738  RNVGVYREGNDL--IPLMVRAPENERHHERAIENSEVFSAQAGRYIPVSQLVDSVDTVYQ 795

Query: 840  RAIDAPIIRKNMIPMIMVVADMA-GPLDSPLYGMFEIAGSINQEGGLGFDQHYVNQPSGL 898
               DA + R N +P I+V AD A G + +  +    +   I Q          +  P+G 
Sbjct: 796  ---DALLRRINRMPTILVQADPAPGVMTADAFN--NVREKIEQ----------IELPAGY 840

Query: 899  DSIAVLWDGEWKITYETFRDMGIAYGVGMIAIYLLVVGQFRSYSVPLIIMAPIPLTIIGV 958
            +   ++W GE+K + +    + ++   G  A+ L VV  F +   PL+I    P  ++GV
Sbjct: 841  E---LIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMTAPFAVVGV 897

Query: 959  MPGHALLGAQFTATSMIGMIALAGIIVRNSILLVDFINQETAAGVPFEQAVIHSGAVRAK 1018
              G       F   +++G ++L G++V+N+I+LVD  + E  AG     A+I +   RA+
Sbjct: 898  TIGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIIDAAVSRAR 957

Query: 1019 PIMLTGLAAMIGALFILDDPIFNGLAISLIFGILVSTLLTLVVIPVLYYAVM 1070
            P++L     ++G   +L DP F  +A++++FG+L +T+LTLVVIP L+YAV+
Sbjct: 958  PVLLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIP-LFYAVL 1008