Pairwise Alignments

Query, 1084 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  282 bits (722), Expect = 8e-80
 Identities = 266/1063 (25%), Positives = 491/1063 (46%), Gaps = 88/1063 (8%)

Query: 29   LSAITPLLAL-LGLLLGLFAVMVTPK---EEEPQIDVTFADIYIPFPGATPSEVEHLVTQ 84
            +S   P+ AL L +LL +F V+   K    E P I+     +   + GA+ + +E  +T 
Sbjct: 6    VSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITS 65

Query: 85   PMEEVISQIKGIDTLYSFSQPDGALIIAIFEVGIPRNEAIVKLYNQVYSNKDKVASQAGV 144
             +E+ ++ I GID + S S+   + I   FE+G   N  +  + + V   +  +  +A  
Sbjct: 66   VLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEAD- 124

Query: 145  GEPQI-KPRGIDDVPI-VSLTLWSKDKAQSAEQLTHIAKGLESELKRIPGTREIYSVGSH 202
             +PQ+ K  G     + ++L+    D+ Q  +   +I + L      I G   +   G  
Sbjct: 125  -DPQVFKNNGSGQASVYINLSSSEMDRTQLTD---YIERVLLDRFSLISGVSSVDVSGGL 180

Query: 203  EISLNVRIDPAKMSFYGLTYDDINRSLSSNNHVSMPVSLVQDNQEIKVQTGQFLKSKQEV 262
               + VRI P  M+  G+   DI+ +L+  N  S    +  D+  + V+T +  +S ++ 
Sbjct: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240

Query: 263  EQLVVAVYQDESGQSAPVYLGDIAKISLNSDIPTQHAWHGDKSAIYPAVTIAIGKQPGEN 322
            E LVV    D      P+YL D+A + + ++          KS     V++ I  Q   N
Sbjct: 241  EYLVVKRASD----GTPIYLKDVADVFIGAENENSTF----KSDGIVNVSMGIVPQSDAN 292

Query: 323  AVDIANVILERLDKIDNILVPDDVNITVSRNYGKTAG-DKANTLILKLVFATSAVVILV- 380
             +++A  + E +DK+   L P    + +  +Y  T   +++ + +   +F T  +VILV 
Sbjct: 293  PLEVAKRVHEEVDKVQQFL-PKGTRLAI--DYDSTVFIERSISEVYSTLFITGGLVILVL 349

Query: 381  FLTMG-LRESVVVGIAIIITLAITLFASWAWGFTLNRISLFALIFSIGILVDDAIVVVEN 439
            ++ +G LR +++  + + ++L     A++ +GF++N I+L ALI SIG++VDDAIVVVEN
Sbjct: 350  YIFIGQLRATLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVEN 409

Query: 440  IHRHMALGKRSFVELIPVAVDEVGGPTILATFTVIAALMPMAFVSGLMGPYMSPIPINAS 499
            I  H+  G++  +        EVG   I  T  ++   +P++F+ G++G   +   +  +
Sbjct: 410  IFHHIERGEKPLLAAYK-GTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLA 468

Query: 500  MGMLISLAIAFIVTPWLATKLLKGHQHQGGDGEHDVDDRMLRLFTRLISPFVRGKQAGKA 559
            M ++ S  IA  +TP L +KLLK +   G       +  + RLF RL S + R   +   
Sbjct: 469  MAVIFSSLIALTLTPVLGSKLLKANVKPGR-----FNQLIDRLFARLESGY-RQVVSRAI 522

Query: 560  RIGLGAAIALLIMIAVSLPVGQLVVLKMLPFDNKSEFQVMLDMPEGTPVEQTQRVLKALA 619
            R    A + +   I  S  + QLV  ++ P +++    V+     G       R    +A
Sbjct: 523  RWRWAAPVVIAACIGGSYGLMQLVPAQLTPSEDRG---VIFSFVRGADATSYNR----MA 575

Query: 620  MELDKVEEVDNYQLYAGTAAPMNFNGLVRHYFLRQ-------SQELGDIQVNLVDKGDRD 672
              +D VE+            P+   G ++ + ++          + G + + L D  DR 
Sbjct: 576  ANMDLVEQ---------RLMPLLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRT 626

Query: 673  RDSHSIASEVRRALQATAKQYHANVKVVEVPPGPPVWS--PILAEVYGPNAEMRETAANA 730
              +    S+VR+AL         +V+V    PG    S  P+   + G +    +T A  
Sbjct: 627  VTAQEALSQVRKALAGIP-----DVRVFPFMPGFRGGSNEPVQFVLGGSDYSELKTWAEK 681

Query: 731  LQQLFHDTQDVVDIDIYLPAAQQKWQVNIDRAKASLMGVPYSNIVDLVATSVGGKAVSYL 790
            L++    +  +   DI       +  V ID+ +A+ +G+   +I D +   +GGK V+  
Sbjct: 682  LEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTF 741

Query: 791  HKPNQKSPVPIKLQLEEGAKVDLEQVLNLRLTNASGNSVPVSELITIHKRAIDAPIIRKN 850
             +  ++  V   L+ +E +  +   +  + +  A+G  V +  +  I + A    +   N
Sbjct: 742  VERGEEYDV--YLRGDENSFNNAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYN 799

Query: 851  MIPMIMVVADMAGPLDSPLYGMFEIAGSINQEGGLGFDQHYVNQPSGLDSIAVLWDGEWK 910
                + + A++        Y + +    ++Q+           Q    + I+V + GE K
Sbjct: 800  KQKSVTITANLEAG-----YTLGQALDFLDQKA----------QEILPNDISVSYSGESK 844

Query: 911  ITYETFRDMGIAYGVGMIAIYLLVVGQFRSYSVPLIIMAPIPLTIIGVMPGHALLGAQFT 970
               E    + I + + ++  YL++  QF S+  PL++M  +P+ + G   G  ++G    
Sbjct: 845  DFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLFVMGQGMN 904

Query: 971  ATSMIGMIALAGIIVRNSILLVDFINQETAAGVPFEQAVIHSGAVRAKPIMLTGLAAMIG 1030
              S IGMI L G++ +N IL+V+F NQ    GV FE+A+I + A R +PI++T    + G
Sbjct: 905  IYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMTAFTTLAG 964

Query: 1031 ALFIL-------DDPIFNGLAISLIFGILVSTLLTLVVIPVLY 1066
            ++ ++       +  I  G  I   FG+  +TL+TL+VIP +Y
Sbjct: 965  SIPLIVSTGAGYESRIAVGTVI--FFGMGFATLVTLLVIPAMY 1005