Pairwise Alignments

Query, 1084 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

Subject, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

 Score =  244 bits (624), Expect = 2e-68
 Identities = 255/1061 (24%), Positives = 466/1061 (43%), Gaps = 89/1061 (8%)

Query: 36   LALLGLLLGLFAVMVTPKEEEPQIDVTFADIYIPFPGATPSEVEHLVTQPMEEVISQIKG 95
            ++ L +LLGL A+      E P++  T   +   + GA+   ++  +TQP+E+ ++Q   
Sbjct: 17   ISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQPLEQAVAQADN 76

Query: 96   IDTLYSFSQPDGALIIAIFEVGIPRNEAIVKLYNQVYSNKDKVASQAGVGEPQIKPRGID 155
            ID + S S    + I    ++    N A+  +  +  S + ++  +A   +P +      
Sbjct: 77   IDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKEAE--DPTVTMSTGS 134

Query: 156  DVPIVSLTLWSKDKAQSAEQLT-HIAKGLESELKRIPGTREIYSVGSHEISLNVRIDPAK 214
               ++ +   S + A S  Q+T ++ + +  +L  + G   I   G  + +L V +DPAK
Sbjct: 135  TTAVLYIGFTSNELASS--QITDYLERVVNPQLYAVNGVSSIDLYGGMKYALRVWLDPAK 192

Query: 215  MSFYGLTYDDINRSLSSNNHVSMPVSLVQDNQEIKVQTGQFLKSKQEVEQLVVAVYQDES 274
            M+   L+  D+   L++NN+ S     +    E  +  G        VE L   V + E 
Sbjct: 193  MAALNLSAADVMSILNANNYQSATGQAIG---EFVLYNGSADTQVSTVEDLESLVVKAEK 249

Query: 275  GQSAPVYLGDIAKISLNSDIPTQHAWHGDKSAIYPAVTIAIGKQPGENAVDIANVILERL 334
            G      LGDIAK++L     T  A    + A+  A+  A    P  N ++IA  +LE L
Sbjct: 250  G--TVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAA----PSANPINIAKDVLEML 303

Query: 335  DKIDNILVPDDVNITVSRNYGKTAGDKANTLILKLVFATSAVVILVFLTMGLRESVVVGI 394
             ++   + P ++ + V  +      +  + +I  +V A   V++++ L +G   +V++ I
Sbjct: 304  PELQKNM-PSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLIPI 362

Query: 395  AII-ITLAITLFASWAWGFTLNRISLFALIFSIGILVDDAIVVVENIHRHMALGKRSFVE 453
              I ++L          GF+ N ++L A++ +IG++VDDAIVV+EN+ RH+  G+  F  
Sbjct: 363  VTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPFRA 422

Query: 454  LIPVAVDEVGGPTILATFTVIAALMPMAFVSGLMGPYMSPIPINASMGMLISLAIAFIVT 513
             I +   E+  P I  T T+ A   P+A + G+ G       +  +  + +S  +A  ++
Sbjct: 423  AI-IGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTLS 481

Query: 514  PWLATKLLKGHQ--HQGGDGEHDVDDRMLRLFTRLISPFVRGKQAGKARIGLGAAIALLI 571
            P + +K+LK ++  ++     H + DRM   + R+++  +  +            IA   
Sbjct: 482  PMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRP---------VVIAFAF 532

Query: 572  MIAVSLP-VGQLVVLKMLPFDNKSEFQVMLDMPEGTPVEQTQRVLKALAMELDKVEEVDN 630
            ++  SLP + + +  ++ P ++K    +M   P    ++     +  +   L    EV  
Sbjct: 533  IVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQF 592

Query: 631  YQLYAGTAAPMNFNGLVRHYFLRQSQELGDIQVNLVDKGDRDRDSHSIASEVRRALQATA 690
             Q++ G        G+                 ++V    R+    ++ + V   +Q   
Sbjct: 593  AQVFTGVPNSNQAFGI----------------ASMVPWSQREASQATVTNRVGTLVQDIP 636

Query: 691  KQYHANVKVVEVPPGPPVWSPILAEVYGPN--AEMRETAANALQQLFHDTQDVV-DIDIY 747
                   ++ E+ PG     PI   +  P+    +   A + L ++  +   V  D+D+ 
Sbjct: 637  GMAVTAFQMPEL-PGAGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLN 695

Query: 748  LPAAQQKWQVNIDRAKASLMGVPYSNIVDLVATSVGGKAVSYLHKPNQKSPVPIKLQLEE 807
              +A  K  +NID+ KA   GV   +I   ++T +    V+ +   N +S   I  Q+E 
Sbjct: 696  FDSATMK--INIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDL-NGRSYEVIP-QVER 751

Query: 808  GAKVDLEQVLNLRLTNASGNSVPVSELITIHKRAIDAPIIRKNMIPMIMVVADMA-GPLD 866
              +++ E + +  +  A G  +P+  L+TI   A    +   N +    V A  A G   
Sbjct: 752  KWRLNPESMNSYYVRAADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAM 811

Query: 867  SPLYGMFEIAGSINQEGGLGFD-----QHYVNQPSGLDSIAVLWDGEWKITYETFRDMGI 921
                  FE   S     G   D     + YV + S L              Y TF     
Sbjct: 812  GDAINWFENLASSKLPKGYSHDYMGEARQYVTEGSAL--------------YATF----- 852

Query: 922  AYGVGMIAIYLLVVGQFRSYSVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALA 981
              G+ +  I+L++  QF S   PL+IM  +PL I G +   A   A     S +G+I L 
Sbjct: 853  --GLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATMNIYSQVGLITLV 910

Query: 982  GIIVRNSILLVDFINQETAAG-VPFEQAVIHSGAVRAKPIMLTGLAAMIGALFILDDPIF 1040
            G+I ++ IL+ +   +E     +   +AV+H+  VR +PI++T  AAMI  L  L     
Sbjct: 911  GLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMT-TAAMIAGLIPLMYATG 969

Query: 1041 NGLA------ISLIFGILVSTLLTLVVIPVLY-YAVMRHRP 1074
             G A      I ++ G+ + TL TL V+PV+Y Y   +H+P
Sbjct: 970  AGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKP 1010