Pairwise Alignments

Query, 483 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

Subject, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

 Score =  189 bits (480), Expect = 2e-52
 Identities = 135/484 (27%), Positives = 242/484 (50%), Gaps = 26/484 (5%)

Query: 17  LMMGIGLWAYKATDSVDDYILGGRSMGPAVTALSVGASDMSGWLLLGLPGAV-YLGGLGE 75
           +++GI     K    V D++LGGR++ P ++A S G +  S  + +G  G + +  G+  
Sbjct: 1   MIIGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPT 60

Query: 76  AWIGIG-LVFGAWLNWLFVAKRLRIYTQFTDNALTLPDFFEKRFEDKQSVLKLVSAVTIL 134
            WI +G  + G++L W  + K+ R  TQ    A T+P F EKR++ K   L+ ++A  I 
Sbjct: 61  MWIVVGNTIIGSFLAWQVLGKKTREMTQRL-GASTMPSFLEKRYKSKN--LESLTAFIIF 117

Query: 135 VFFTFYTSSGMVGGAILFEKVFGLDYNLALLIGSGIIVAYTFVGGFFAVSWTDFFQGCLM 194
            F   Y++S   G   LFE  FG+    A ++ + +   Y + GGF A +  DF QGC+M
Sbjct: 118 FFLVPYSASIYKGLNFLFEG-FGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIM 176

Query: 195 LIALLIVPVTIFSQPETQ------NGIHSLDPAMLSLLSDNTTMIGLASLLAWGLGYFGQ 248
           +I +L++   + S PE        + + S+DP +++ +++ + +  +   L   +G +G 
Sbjct: 177 VIGVLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGL 236

Query: 249 PHILSRFMAIGSADDLKVSRRIAMSWMIVALMGALATGLAGTLYFADQP------IDNPE 302
           P ++ +F  I S      ++ ++ ++  +   GA   G    L++ D        + +P+
Sbjct: 237 PQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSPD 296

Query: 303 TIFIHLAHAAFNPWIGGLLVAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPDASSKEL 362
            I   +   A   W+  L++  ++SA MST+ S +L  SSV++ DF K  L+ D S K  
Sbjct: 297 MIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNT 356

Query: 363 MMIGRIGVLTIAVISGVIALNPESSVLSLVSYAWAGFGAAFGPVVILSLFWRGYSRNGAV 422
           M++ R+  +   V+S ++A+ P S VLSL++ +W            L L+W+  ++ G  
Sbjct: 357 MILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKEGVW 416

Query: 423 ATIIVGAITVVLWKQSTGGIFDLYEILPGFLFATLAGVL----VSLVSAPADSTREQFEQ 478
           A  I  A+ ++L      GI  +Y    G L A +A +     VSL++ P +  RE  + 
Sbjct: 417 AG-ITSALAIMLGGAYYFGINSVYMPAVGSL-AMIAPIFVVMAVSLITKPFE--REHIDY 472

Query: 479 FSQK 482
              K
Sbjct: 473 IFNK 476