Pairwise Alignments

Query, 234 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 253 a.a., DUF3379 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (270), Expect = 1e-28
 Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 16/240 (6%)

Query: 1   MDELKFRREAYENPNRQDDEFLASMHESSERTAFVNDLKLLDKKLEAALKIEVPEDLEAK 60
           MDEL+FRR+   +P ++D++ L  M  S     FV+D+  LDK++  A K++VP+DL  K
Sbjct: 11  MDELEFRRKVMSDPKQRDNDTLDMMTSSEANAKFVDDVLQLDKQIAQAFKVDVPDDLADK 70

Query: 61  LLLNQQ--LHQHQVDRRK-TGFTLALVASIAFIAGI-------SFTLLRLAPVDLGQHAL 110
           +L  Q   +   +V R +     +A+ AS+AF AG+          L+  A   L   A+
Sbjct: 71  ILFKQTTLVEDEKVIRPQFVRKAMAIAASVAFTAGLLVGQIQWGNLLISPAQASLSDMAV 130

Query: 111 AHVYHEE-MAMKSEENISVDEVNTQLASLTSLKHAHFTEQPGRVLYSTYCDFQGVKSIHL 169
            HV HEE    + +E   + ++N ++          F   P  V Y  +C F    ++H+
Sbjct: 131 QHVIHEEGFVNRLDEQADMQQINAKMRPFAYKMEGDF---PYHVYYLNHCGFGKDNAVHM 187

Query: 170 VMQGKQGKVTLFIVPLEDRMVLEEAFADNRYQGMGFKSDNAYVLLVGEHATDLDFVRDEV 229
           V QG++GKVTLF  P+         F      G+     NA ++LVGE   +L  + +++
Sbjct: 188 VFQGEKGKVTLFFTPIHSAQ--SSLFKQEGMAGIIEPVGNASLILVGEKDENLTNIANKL 245