Pairwise Alignments

Query, 309 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 323 a.a., hypothetical protein PA3071 from Xanthomonas campestris pv. campestris strain 8004

 Score =  140 bits (353), Expect = 4e-38
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 16/304 (5%)

Query: 6   LPLFADGVSLNQKELLACQNLARALPERKSKARAALAGHRASSIKGRGMEFAEVRHYQAG 65
           L +  DGV     EL+A +  AR    +  + R  L G   ++ +GRGME+AE R Y AG
Sbjct: 22  LSVAGDGVRPQLAELIALRGAARQR-HQPGRGRHGLVGPVPAATRGRGMEYAESREYVAG 80

Query: 66  DDVRTIDWRVTARTGKAHTKLFVEERERPVLLLLDLSHSLYFGSSLMLQSVQAAHLAATL 125
           DD R IDWRVTARTG+AHTKLF  ERER  L++ D + +L+FG+ +  +SVQAA   A  
Sbjct: 81  DDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTAPALFFGTRVRYKSVQAARAGAVA 140

Query: 126 GWAAVGHGDRLGALIASEAEHLELKPRSRQTGMLALISAIEQIHQQQLHQLNQPVKQPEH 185
            W A   GDR+ AL  + +E   + PR+ Q G+L ++ A+ + +        QP      
Sbjct: 141 AWLAQRQGDRIAALRGTASE-APIAPRAGQRGVLPVLDALARWYA-------QPPADDAG 192

Query: 186 IFKACQRLRRIAKPGSLIWIISDGSHFGPQCLGPLSELKRHCDIGAFLITDPLRQGTLKL 245
           +        R+ +PG+ + +++D            S L  H ++   ++ DPL       
Sbjct: 193 LQVGLDHAARLLRPGARLTVLADARSAAAVPESRWSGLALHHEVVVIVLVDPLELA---- 248

Query: 246 PPQFQFPVRDGDKELMLD---RRSYDAWLAQQQTQQQGFITMMNQINARPRRIDAAQPLD 302
           PP        G + + +D   +     W A+     +   T++     R  R+  A   D
Sbjct: 249 PPARALTFDAGGQRITVDLTTQAGRAQWNAEFVAPLERLSTLLQARGVRLHRLSTADASD 308

Query: 303 QQIG 306
             +G
Sbjct: 309 AWLG 312