Pairwise Alignments

Query, 706 a.a., multifunctional fatty acid oxidation complex subunit alpha (RefSeq) from Shewanella loihica PV-4

Subject, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

 Score =  399 bits (1025), Expect = e-115
 Identities = 258/725 (35%), Positives = 390/725 (53%), Gaps = 37/725 (5%)

Query: 3   KSFTLNRLDNGIAVLTMDVPGETMNTLRAEFGPEICEMLAEIKADAGIRGVVIISGKKDS 62
           K+  + +L NGIA L+   P  ++N L       + + L  + AD+ ++G+ ++S  K++
Sbjct: 6   KTLQVKQLANGIAELSFCAPA-SVNKLDLHTLESLDKALDALAADSSVKGL-LLSSDKEA 63

Query: 63  FVAGADISMLDACATAEDAR--ELSKQGHEVFFALESLSIPVVAAINGACLGGGLELALA 120
           F+ GADI+         +A   E  +  + +F  LE L  P ++A+ G  LGGG E  LA
Sbjct: 64  FIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCECVLA 123

Query: 121 CHQRVCTDSNKTMLGLPEVQLGLLPGGGGTQRLPRLVGIAKSLDMMLTGKQLRAKQALKM 180
              R+      T +GLPE +LG++PG GGT RLPRL+G   +++++  GK  RA++ALK+
Sbjct: 124 TDFRI--GDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEALKV 181

Query: 181 GLVDDVVPESILLQTAIEMALAGA--------RPAKKPKLSTVEKLLEGTPVGRNIIFEQ 232
           GL+D +V    L+ +AI               R  +K    T+ KL         + F  
Sbjct: 182 GLLDAIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKL------EAMMSFTM 235

Query: 233 ALKQVNKKTQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSNESEALRSIFFA 292
           A   V +    +YPAP   +  + +         L++E +HF  L  S E++AL  IF  
Sbjct: 236 AKGMVAQVAGKHYPAPMTSVVTIEEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLN 295

Query: 293 TTEMKKESGAGDVSPKAVNK----VMVLGGGLMGGGIASVTTTKAKIPVRVKDISEIGLS 348
              +K   G    S KA ++      VLG G+MGGGIA  +  K  +PV +KDI+   L 
Sbjct: 296 DQYIK---GLAKQSAKAASQDTQHAAVLGAGIMGGGIAYQSALKG-VPVLMKDIAPHSLE 351

Query: 349 NALAYAYKLLAKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFEDLNLKHQM 408
             +  A KLL K ++R  +       ++A +T +  Y GI  AD++VEAV E+  +K  +
Sbjct: 352 LGMTEAAKLLNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVENPKVKAAV 411

Query: 409 VKDVERECGEHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEVIAHDKTS 468
           + +VE      TI  SNTS++PI  +A++ +RP+N  G+H+F+PV +MPLVE+I  + TS
Sbjct: 412 LSEVEGLVDTETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTS 471

Query: 469 PQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHLDKALVK- 527
             TI   VA+A K GK+PIVV D  GF+VNR+L  Y    + L+ +G +   +DK + + 
Sbjct: 472 EDTINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQ 531

Query: 528 FGFPVGPMTLLDEVGIDVGAKISPILEKELGERF--KAPAAFDKLLADDRKGRKNGKGFY 585
           FG+P+GP  LLD VGID       ++ +    R       A D L    + G+KNG GFY
Sbjct: 532 FGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFY 591

Query: 586 QYGAKSK---KKLVDESVYGVLGLTPGA--DGEPIALAERCVVQMLNEAVRCLEEGIIAS 640
           QY    K   KK   + V  +L    GA    +P  L ER ++ M+NE V CLEEGIIAS
Sbjct: 592 QYTVDKKGKPKKAFSDDVLAILAPVCGAPQSFDPQTLIERTMIPMINEVVLCLEEGIIAS 651

Query: 641 PRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQFGDRFAPCDRLVEMAES 700
            ++ D+  ++G+GFPPF GG FRY+D++G  + V   ++Y D  G  +     L  MA+ 
Sbjct: 652 AQEADMALVYGLGFPPFRGGVFRYLDTIGIANYVAMAEKYAD-LGALYQVPQLLKNMAQQ 710

Query: 701 GSKFY 705
           G+ FY
Sbjct: 711 GTSFY 715