Pairwise Alignments

Query, 309 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 304 a.a., epimerase from Vibrio cholerae E7946 ATCC 55056

 Score =  277 bits (709), Expect = 2e-79
 Identities = 152/314 (48%), Positives = 198/314 (63%), Gaps = 16/314 (5%)

Query: 1   MRILITGGTGFIGKALVKALEGEHQLTLLTRSAGKA-----HLTLGNQHKLLGNLSALAN 55
           MRILITGGTGF+G  L+K L   H+L +LTR   KA     H+   N  +LL +L  L++
Sbjct: 1   MRILITGGTGFVGFELIKLLSS-HELLVLTRDLTKAAQRFAHIPSQNL-QLLRSLDELSD 58

Query: 56  LDGFDAVINLAGEPIADKRWSLEVKQKICDSRWDTTARLAKLFEASKTPPKVFISGSAIG 115
            +G DA+INLAGEPIADKRWS   KQ+I  SR D T +L +   AS  PP VF+SGSA+G
Sbjct: 59  FNGIDAIINLAGEPIADKRWSKSQKQRIARSRLDITEQLVEKIHASAHPPAVFLSGSAVG 118

Query: 116 IYGDHDKQVHLDESFDLAHFKDTGKEEKFPHSVCAKWEELALQCQG-LTRVCVMRIGLVL 174
            YGD  +    DES  +       + + F H VC +WE+ AL+ Q   TRVC++R G+VL
Sbjct: 119 FYGDQQQHA-FDESLQV-------RSDHFSHQVCQQWEQRALKAQSEQTRVCLLRTGIVL 170

Query: 175 GLNGGALKKMLLPFKLGAGGVVGSGKQGMSWIHREDLIAIILFLLNNEQCQGIYNATAPN 234
              GGALKKML P++LG GG +G G+Q M WIH +D++  ILFLL  E  QG YN  AP+
Sbjct: 171 APEGGALKKMLPPYRLGLGGPIGDGQQYMPWIHMQDMVRAILFLLETEHAQGPYNLCAPH 230

Query: 235 PVSNREFTNSLGTALSRPTLLPMPAPILSLALGEMSQLLLEGQYVYPDRLTQAGFSFHYT 294
           PV+N EF+ +L T L RP L   P  ++ + LGE S+LLL+     P +LT  GF FHY+
Sbjct: 231 PVTNAEFSLTLATTLKRPHLFKTPQWLIKMLLGEASELLLDSIRAKPKKLTDLGFQFHYS 290

Query: 295 HLDDALTNLFGASK 308
            +D A   L  AS+
Sbjct: 291 RIDRAFNQLLTASQ 304