Pairwise Alignments

Query, 305 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 10/216 (4%)

Query: 52  DEAALEELTQAIQARWRE-EQGEQGFNLVFQHRCAGQTQTHLLYGEVPEPHLVSENGARF 110
           +E A   LT  I+A  +  +       L  + R  G +Q   L G+  +   ++E G + 
Sbjct: 457 EEKAKRRLTDIIRAAIQVLDVDANNVVLKVRERQKGTSQYEKL-GQQAQTMQITEYGVKL 515

Query: 111 QIHLLRGQNHGLFLDMRAGRAWVKANAAQANVLNLFAYTCGFSVMALQGGADQVVNIDMS 170
            ++L    + GLFLD +  R  +   A   + LNLFAYT   +V A  GGA     +DMS
Sbjct: 516 IVNLYDYLDTGLFLDHKITRRRLGQMAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMS 575

Query: 171 KGALAIGKQNHLLN-EFPHGARFLGHDIFKSWGKLTKMGPYDLIIADPPS-----NQRGS 224
           K  L   K+N  LN +     +++  D  + W        YDLI  DPP+         +
Sbjct: 576 KTYLEWAKENMQLNGQVGRQHQYVQADCLQ-W-LANAQSQYDLIFIDPPTFSNSKRMEQT 633

Query: 225 FVATKDYARLLRRLPQLLAPQGEVLLCLNAPELGID 260
           F   +D+  L+  L +LL P+G ++   N     +D
Sbjct: 634 FDVQRDHVTLMTNLKRLLRPEGTIVFSNNKRHFKMD 669