Pairwise Alignments

Query, 305 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 8/166 (4%)

Query: 92  LLYGEVPEPHLV-SENGARFQIHLLRGQNHGLFLDMRAGRAWVKANAAQANVLNLFAYTC 150
           +L+GE+P   +V  ENG +  + ++ G   G +LD R  R        +  VLN F+YT 
Sbjct: 172 VLHGELPPKSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTG 231

Query: 151 GFSVMALQGGADQVVNIDMSKGALAIGKQNHLLNEF---PHGARFLGHDIFKSWGKLTKM 207
           GF + AL+GGA +V+N D+S+ AL   K N  LN F      A FL  D+FK   +    
Sbjct: 232 GFGLYALKGGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQ 291

Query: 208 GP-YDLIIADPPSNQRGSFV---ATKDYARLLRRLPQLLAPQGEVL 249
           G  +D+++ DPP           A + Y  +     Q+L P G +L
Sbjct: 292 GTRFDVVVMDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLL 337