Pairwise Alignments

Query, 895 a.a., TonB-dependent receptor, plug (RefSeq) from Shewanella loihica PV-4

Subject, 976 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  266 bits (679), Expect = 6e-75
 Identities = 265/970 (27%), Positives = 405/970 (41%), Gaps = 148/970 (15%)

Query: 32  ADEDSVERIQVTGSRIKRTDMETATPVTVMSAEDMAKQGFTNVQDALESLTSTTSAMTTQ 91
           AD   ++ + VTGSRIKR   E   PV ++ +E++  QGFT V D L +L      +   
Sbjct: 31  ADPQQLDAVTVTGSRIKRVQAEGPAPVQIIGSEEIRAQGFTTVYDMLGTLNQAIGTVEAD 90

Query: 92  SVHG-FTPAASSISLRGAGANRTLTLINGKRLNQYPKPSGGTDNFVDTANLPMEAVQRIE 150
              G  TP AS ++LR  G NR+L L+NG+R+  YP P  G  N  + +N+P  AV R+E
Sbjct: 91  VSWGSHTPNASPLNLRNLGPNRSLLLVNGRRVADYPLPYNGQSNVSNYSNIPAAAVDRVE 150

Query: 151 VLQSGGSAIYGADAVGGVINIILKKDFEGVALKYRHGDTTNGGGGSDRIALSLGASSDRG 210
           VL  G SAIYG+DA+ GV+N+ILK+++ G   + R G +T GG  +  ++ + G + D  
Sbjct: 151 VLTGGASAIYGSDAIAGVVNVILKQNYSGDQFRMRGGTSTEGGRDTADVSWAGGRTGDNW 210

Query: 211 NVSTFIEFTDNEQLKATDRENFGLHTDKVPYSEFSAYS-------SYGARIVGSGTGARQ 263
           +V+  +++T  + L   DR      +D  PYS ++          S G  ++ + TG RQ
Sbjct: 211 SVTYALQYTSRDPLFGRDRPQMDDASD-APYSAWTTEQRRVGFRPSSGIALIDNATGTRQ 269

Query: 264 LTEE---ECTAGGYLW---------------TGSLCGF--DRSEWRDLQPKSSRFISSTN 303
                  E   G Y                 TG LCG   D  +W  L    S+ +S   
Sbjct: 270 APPPGACEQFGGAYYRADRLLYNRNTDTTTNTGQLCGLSADYGDW--LLRSGSKDLSGYL 327

Query: 304 F-NYELADDISFVGRLDFAEAKSTTNIEPMAINDYDIKVAGNSVTVSNGDLSKTFNDKTT 362
           +  +E  + +     L   ++++     P              V +  G     F+D T+
Sbjct: 328 YGTWEFGNGVQAWTNLAVFDSEAQWGTSP------------PYVQLPAGLDYPAFHDVTS 375

Query: 363 ALGGDFANATDGDYNYLRRLHEFSNRAGETKTRNYFFTAGLEGTLAD-EYSWDAS----- 416
             G           N +       NR    + R++  +AGL GTLAD  + WDAS     
Sbjct: 376 --GQQLIGVRQFTANEVGSQAGLRNR---NRERSWDISAGLRGTLADGRFDWDASLGRSY 430

Query: 417 ---------VNYGRTNVDVFRSGYATVGGMFDYITAGENGNSLLKNMSAEDVEQASYSPF 467
                    V++ R N         TV G+  Y     +       ++     Q      
Sbjct: 431 YRVQERISTVDWQRANDYFLGPQLGTVDGLPAYAL---DRARWWTPLTPGQYAQIGAHSV 487

Query: 468 EKAQSTQKNIQANISGMAFEMPAGDAQFAFGAEYTEQDYETNTDSESKKGNILTTGGSSG 527
            +A S       ++SG  F+  AG  +FA   E  +Q Y  N D  +   +        G
Sbjct: 488 NRAASWVNQGALSLSGTLFDGWAGPIEFAAVVEAAQQGYRLNPDPRANL-DYEVQNVDRG 546

Query: 528 AGERSFWATYAELSLPVLDVLTVDAALRYDRYDDF-----GGNLSPQLT---------IE 573
            GER+ ++   E S+P+   LT   A RYDRY D+       NL    T         ++
Sbjct: 547 GGERTRYSGGLEFSVPLTTTLTATLAGRYDRYGDYEAFNDDANLLDIGTQKESTWSAGLQ 606

Query: 574 YRPLSELLVRGSISSVFRAPDMHRVYGDATKGFSTVIDFKQCQALGGIPGQGYPGDETLN 633
           +RP+  LL+RGS ++ FRAPDMH + G  +      +D  +C A G        GD T  
Sbjct: 607 WRPIDSLLLRGSYATSFRAPDMHYLLGQPSSAQVRTLDQYRCIASGAYQTNNCTGDNT-- 664

Query: 634 AVCKELHVDTTTGANKDLEAETGYTANIGAVWGGDAL-NASF--DLWEWKLDDMVSDISA 690
           AV     ++       DLE+E G +  +G VW  DA  N SF  D W   LD+ + DI  
Sbjct: 665 AVTYPFAINRR--GTPDLESELGDSWTVGFVW--DAFENFSFTADYWRIHLDEEIRDIDE 720

Query: 691 SKAAREYEQYESMLT------------------------RDASGTITHVNAVAQNLAFQK 726
           +   R+     + LT                        RD SG IT +     NLA + 
Sbjct: 721 TTILRDEAGCRTGLTITPGQAWSNPGGADYCASILARVQRDGSGAITAIERGPINLAQRD 780

Query: 727 VRGLDITAGYSWDLDNIGELKLNFTGTYILLSEYQLSPTDPVEDDLENGGLPQYRANVVL 786
           V G+D++A Y       G+ ++    T +     Q   TDP  +  +     + R +V  
Sbjct: 781 VSGIDLSARYQLK-TGFGDFQMGLDYTNLRSMREQTYRTDPNPERRDRDIRSKLRGSV-- 837

Query: 787 GYYIDDFEAT-----LGAYHTARMH------------------GVQYKTFKQSAID-NNE 822
            +   ++ AT     +GA  + R H                  GV       +  D N+ 
Sbjct: 838 SWLYGNWNATVYGDRVGAVPSVRSHWGLDRLDNPGGCVPFADGGVPDDRANCTDTDPNSP 897

Query: 823 AFDESAHE----VASQTKWNLTAGYNITDAIKVKAGVVNLFDA-GPNF-DPTDTSWPHYP 876
            F +S  +    V     WN+  GY IT A+K+   + N+F++ G N  DP    +  Y 
Sbjct: 898 TFGQSTRKYFGRVGPAITWNVNVGYRITPAMKLNLYINNVFNSTGYNHKDPYKLDYEFYN 957

Query: 877 RSVYNARGRE 886
             +++  GRE
Sbjct: 958 SRLFSPVGRE 967