Pairwise Alignments

Query, 895 a.a., TonB-dependent receptor, plug (RefSeq) from Shewanella loihica PV-4

Subject, 996 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  202 bits (513), Expect = 1e-55
 Identities = 245/1015 (24%), Positives = 396/1015 (39%), Gaps = 158/1015 (15%)

Query: 7   LAKAVRFALIGGAATAALSVPAVYSADEDSVERIQVTGSRIKRTDMETATPVTVMSAEDM 66
           L+ A+   L+  A  A        + D   ++++ VTGSRI RT   T +PVT ++AE++
Sbjct: 14  LSAALLAVLVAPAGHALAQSENGVAPDTTDLDKVTVTGSRIARTGFVTPSPVTAITAEEI 73

Query: 67  AKQGFTNVQDALESLTSTTSAMTTQSVHGF--TPAASSISLRGAGANRTLTLINGKRLNQ 124
              G T + D +  + +   + T  +   F  T     + LRG G +RTL L+NG+R   
Sbjct: 74  RATGATTISDLMARMPALAPSYTLGNSTRFIGTAGLGLLDLRGMGVDRTLVLVNGRR--- 130

Query: 125 YPKPSGGTDNFVDTANLPMEAVQRIEVLQSGGSAIYGADAVGGVINIILKKDFEGVALKY 184
           +   S G+   VD   +P+E V+R+EV+  G SA+YGADAV GV+N ILKK F G   + 
Sbjct: 131 HVGSSPGS-TAVDVNTIPVEWVERVEVITGGASAVYGADAVAGVVNFILKKSFTGFETRA 189

Query: 185 RHGDTTNGGGGSDRIALSLGA--SSDRGNVSTFIEFTDNEQLKATDRENFGLHTDKVPYS 242
           + G    G       + S G   +  RGN++   E++  ++    +R     +   VP  
Sbjct: 190 QTGLADEGNYNRSFASFSAGTDFAGGRGNIAVSGEYSKQDRFGRGNRAIGREYLVTVPNP 249

Query: 243 EF--------------------SAYSSYGARIVGSGT---------GARQLTEEECTAGG 273
            +                    +  +SYG      GT         G R L  E+ T   
Sbjct: 250 AYDPTRPPSERNPQNVLSGPGGNHSTSYGGTF-NLGTFDFRNPASYGNRYLFNEDGTFRR 308

Query: 274 YLWTGSL--------CGF-DRSEWRDLQPKSSRFISSTNFNYELADDISFVGRLDFAEAK 324
             + G++        C F D +   DLQP   R   +T  N+EL+++     RL F    
Sbjct: 309 NRYDGTVVSNTSCVDCDFADLNAVADLQPGFDRKSVNTMVNFELSEN----HRLFFEGKY 364

Query: 325 STTNIEPMAINDYDIKVAGNSVTVSNGDLSKTFNDKTTALGGDFANATDGDYNYLRRLHE 384
           S T+ E      +D     +S+ V      +  N   +   G   ++       + R + 
Sbjct: 365 SETDSEFFGQPAFD-----SSLRV------RRQNPYVSPELGALMDSRGATQILMNRFNV 413

Query: 385 FSNRAGET-KTRNYFFTAGLEGTLADEYSWDASVNYGRTNVDVFR--------------- 428
            + R GE  + + Y    G EG   D +++D S NYG+T VD                  
Sbjct: 414 DAGRRGENIERKTYRAVLGAEGNFTDNWTYDVSANYGKTTVDRQNLNNRINERWQAGIDA 473

Query: 429 ----SGYATVGGMFDYITAGENGNSLLKNMSAED-----------VEQASYSPFEKAQST 473
               SG        D      N N +   ++ E            V   + + F     +
Sbjct: 474 ARDASGNIVCRTTLDPNAINPNTNRVYSALAREGCVPFSVFGNGAVSPEAAAWFNTTARS 533

Query: 474 QKNIQANI------SGMAFEMPAGDAQFAFGAEYTEQDYETNTDSESKKGNILTTGGSSG 527
           Q  IQ  +      +     +PAGD   A G EY ++  E  TD  +  G        + 
Sbjct: 534 QAKIQQTVFSASVANSNLLSLPAGDIGIAGGVEYRKEQSEEITDPLAASGVTFLNAIPNS 593

Query: 528 AGERSFWATYAELSLPVL------DVLTVDAALRYDRYDDFGGNLSPQLTIEYRPLSELL 581
            GE +    + E ++P+L      D L +D A RY  Y   G   +  + +++  +  L 
Sbjct: 594 GGEYTVREVFVESTIPLLAGLPGVDRLALDLAGRYSDYSSIGSTKTWNIGLDWTIIPSLR 653

Query: 582 VRGSISSVFRAPDMHRVYGDATKGFSTVIDFKQCQALGGIPGQ-GYPGDETL-NAVCKEL 639
           +RG+++   RAP +  +Y   ++ F+T+ D   C  L     + G  GD  L  A C  L
Sbjct: 654 LRGTLAQAVRAPSIGELYDSQSENFATIND--PCNYLSSNSNRPGTAGDVALRQANCSAL 711

Query: 640 HV-----DTTT-------GANKDLEAETGYTANIGAVWGG---DALNASFDLWEWKLDDM 684
            V     DT T       G N +L+ E   + + G VW     +    S D W   L D 
Sbjct: 712 GVPVGWIDTYTANRPGVSGGNPELKPERARSLSYGLVWQPEFFEGFGMSVDYWRIDLQDA 771

Query: 685 VSDISASKAAREYEQYESMLTRDASGTITHV---------------------NAVAQNLA 723
           +  ++A   A         +     G +                         A+ +NLA
Sbjct: 772 IGSVTAETNATRCVDNPGGINNSFCGFVQRAPLGGFTDPQGRIYPEHSIIGWQALNENLA 831

Query: 724 FQKVRGLDITAGYSWDLDNIGELKLNFTGTYILLSEYQLSPTDPVEDD--LENGGLPQYR 781
             +  G+D+   Y + L   G   L   GT ++ S   +    P E D  +     P++R
Sbjct: 832 RSRRVGVDLEMDYRFQLGE-GNTVLRLVGTRLIQSREWVFQDFPEEYDEYVTYVTDPRWR 890

Query: 782 ANVVLGYYIDDFEATLGAYHTARMHGVQYKTFKQSAIDNNEAFDESAHEVASQTKWNLTA 841
           A     Y  +++ A+    +      V  +++      N+     S  +  S T  N   
Sbjct: 891 AQFQTKYNWNEWRASWDMNYVDGNLRVTPESY------NSNPGSASPIKNGSYTYHNFQF 944

Query: 842 GYNITDA-IKVKAGVVNLFDAGPNFDPTDTSWPHYPRSVYNARGREWFLEGEVKF 895
           GY    + I V  G+ N FD  P   P +     +  ++Y+  GR ++L   VKF
Sbjct: 945 GYQFPGSKIDVYLGIDNAFDKDP---PRNYFGSDFTSALYDNVGRFFYLGTTVKF 996