Pairwise Alignments

Query, 895 a.a., TonB-dependent receptor, plug (RefSeq) from Shewanella loihica PV-4

Subject, 962 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  203 bits (517), Expect = 4e-56
 Identities = 216/891 (24%), Positives = 356/891 (39%), Gaps = 138/891 (15%)

Query: 5   SILAKAVRFALIGGAATAALSVPAVYSADEDS------VERIQVTGSRIKRTDMETATPV 58
           ++   AVR  L+      AL+     +A E S      ++RI++TGSRI+  D+ETA PV
Sbjct: 2   NLRTSAVRLGLLPAGIAIALTPAFAANAQEQSAPSTTTLDRIEITGSRIRSVDVETAQPV 61

Query: 59  TVMSAEDMAKQGFTNVQDALESLT-------STTSAMTTQSVHGFTPAASSISLRGAGAN 111
             ++ +D+ K G  +V D L++L+       S  + +T+    G       ++L   G N
Sbjct: 62  FTVTQQDIQKSGLVSVGDILQNLSIAGTQTYSKAAVLTSDPEQG----GQYVNLYNLGEN 117

Query: 112 RTLTLINGKRLNQYPKPSGGTDNFVDTANLPMEAVQRIEVLQSGGSAIYGADAVGGVINI 171
           RTL L+NGKR       +       D + +P   ++RIEVL+ G SAIYG+DAV GV+NI
Sbjct: 118 RTLVLVNGKRW------TSSLSGLTDMSTIPSSLIERIEVLKDGASAIYGSDAVAGVVNI 171

Query: 172 ILKKDFEGVALKYRHGDTTNGGGGSDRIALSLGASSDRGNVSTFIEFTDNEQLKATDR-- 229
           IL+++++G       G    G G  ++ + + G ++DR ++     +T+ + + A DR  
Sbjct: 172 ILRQNYDGAEASAYFGQNGRGDGSKEQYSFTAGTTTDRSSLVFGANYTNEDPVWAKDRAL 231

Query: 230 ENFGLHTDKV--------PYSEFSA---------YSSYGARIVGSGTGARQLTEEECTAG 272
             +    + +        P+  F++           S+  R VG+ +        E T  
Sbjct: 232 TRYSAGPNHIEDSLSATGPWGRFTSNDQTYILNHTGSFDGRGVGADSRNIANYHNEITTD 291

Query: 273 GYLWTGSLCGFDRSEWRDLQPKSSRFISSTNFNYELADDISFVGRLDFAEAKSTTNIEPM 332
            Y        ++  +   LQ  S      T  +Y L D ++F     ++E          
Sbjct: 292 DY--------YNSVDQMMLQQSSRNKSIFTTGSYNLTDSLTFKSTAMYSE---------- 333

Query: 333 AINDYDIKVAGNSVTVSNGDLSKTFNDKTTALGGDFANATDGDYN-YLRRLHEFSNRAGE 391
              D + ++AG  +  S+              G  + N    D N + RR  E   R  E
Sbjct: 334 --RDSNRQIAGYPLQASSQP-----QFPVAISGTSYYNPVGQDINSWFRRTVELP-RTTE 385

Query: 392 TKTRNYFFTAGLEGTL---ADEYSWDASVNYGRTNVDVFRSG--------------YATV 434
           +  +   F A LEG     +  ++WD   NY + +V     G              +   
Sbjct: 386 SNVKTLHFDAALEGVFDVGSHGWNWDVGFNYNKYDVTQVSRGNINLLALQKALGPSFLNA 445

Query: 435 GGMFDYITAGE-----NGNSL--------LKNMSAEDVEQASY-SPFEKA--QSTQKNIQ 478
            G     TA         N+L        L   SA       Y +   +A  QS  K   
Sbjct: 446 QGQVQCGTAASPLPLGTSNALGQCTPFNILGGPSASTPNALQYINALGQATQQSLSKQWT 505

Query: 479 ANISGMAFEMPAGDAQFAFGAEYTEQDYETNTDSESKKGNILTTGGSSGAGERSFWATYA 538
           ANI+G  F++PAG+   A G E+ E       D  S  G        +  G       Y 
Sbjct: 506 ANITGGLFDLPAGELGLAAGVEHREISGYDYPDQLSSAGYTTDLAAQATEGRYQTNEAYL 565

Query: 539 ELSLPVL------DVLTVDAALRYDRYDDFGGNLSPQLTIEYRPLSELLVRGSISSVFRA 592
           EL +PVL        L+ D A RY  Y  FG   + + +  ++P+ +LLVRG+  + FRA
Sbjct: 566 ELLIPVLKDLPGAKELSFDVAARYSNYSRFGDTTNSKFSFTWKPIDDLLVRGTYGTGFRA 625

Query: 593 PDMHRVYGDATKGFSTVIDFKQCQALGG----------IPGQGYPG-----DETLNAVCK 637
           P +   +G  ++ F T  D   C A  G            G+G P      D   NAV +
Sbjct: 626 PTLSDTFGGGSQTFDTFTD--PCDATFGSLGNAGVAARCAGEGLPAGFRQTDTAGNAVTR 683

Query: 638 ---ELHVDTTTG-ANKDLEAETGYTANIGAVWGG---DALNASFDLWEWKLDDMVSDISA 690
              + +    +G  N +LE E   T  +G V+       L+ S D +   + ++++ ++A
Sbjct: 684 RDVQGNAPFNSGVGNAELEPEYSITRTVGMVYSPHWVQGLDFSLDWYRISISNIITSLTA 743

Query: 691 SKA-----AREYEQYESMLTRDA-SGTITHVNAVAQNLAFQKVRGLDITAGYSWDLDNIG 744
           +             Y +   RDA +G +T ++    NL   +  G +    Y       G
Sbjct: 744 NDVLNNCYLNSLASYCADYGRDAVTGQVTTLSRGNVNLGRLETEGYNFGVRYRMPETAYG 803

Query: 745 ELKLNFTGTYILLSEYQLSPTDPVEDDLENGGLPQYRANVVLGYYIDDFEA 795
           +  +N    Y+   + Q        +       P+ RA + L + +    A
Sbjct: 804 KFAVNLDTNYLATYKSQAEAGAEWANAAGYWNFPRVRATLGLDWSLGALSA 854