Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 242 a.a., exonuclease, RNase T and DNA polymerase III from Marinobacter adhaerens HP15

 Score =  108 bits (271), Expect = 7e-29
 Identities = 77/204 (37%), Positives = 111/204 (54%), Gaps = 8/204 (3%)

Query: 15  ALMAKDAGLKAYQQALMPVIDKPFAEAELLAIDLEMTGLNASFDQILSIGVVPIRQGQLI 74
           A  +K   LKAY ++     + P +E   +A+D E TGL+A+   I+SIG+VP     + 
Sbjct: 24  AEQSKSPILKAYYESGCVSPETPLSEVPFVALDFETTGLDANQHSIVSIGLVPFTLDGIQ 83

Query: 75  LSEAQHKLVQIEGSVGQ-SATIHGILDTHLDAALTPEQAMAWFLSVSEGMVLVAHHAPLD 133
           L +A+H +V+ +  + Q S TIHGI  + +D A      +    +   G + V H+  ++
Sbjct: 84  LGKARHWIVRPKLPLHQTSITIHGITHSDIDQAPDLNDILKDLFACLNGRIPVVHYRNIE 143

Query: 134 LAFLQSGLQACLGEKPRLLAIDTLLLEK-----QRLLRQQEHLQEG--CLRLGRSRARYG 186
            +F    LQ  LGE  R   IDT+ +E      +   R Q+ L +    +RL  SR RYG
Sbjct: 144 RSFFDVALQWRLGEGIRFPLIDTMAIEAHLHPDRNPSRWQQLLGKKPVSIRLADSRLRYG 203

Query: 187 LPVYAAHNALIDALACGELLLAQV 210
           LP YAAHNALIDA+A  ELL AQV
Sbjct: 204 LPHYAAHNALIDAVATAELLQAQV 227