Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 235 a.a., DNA polymerase III, epsilon subunit from Marinobacter adhaerens HP15

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 7/170 (4%)

Query: 40  EAELLAIDLEMTGLNASFDQILSIGVVPIRQGQLILSEAQHKLV--QIEGSVGQSATIHG 97
           +  L+ +DLE TGLN S D++++IG V IR G + L + Q  L+  + E  + ++  IHG
Sbjct: 38  DCRLIVLDLETTGLNPSKDEVIAIGAVAIRGGIIHLGD-QFDLILRRPELDIRETVLIHG 96

Query: 98  ILDTHLDAALTPEQAMAWFLSVSEGMVLVAHHAPLDLAFLQSGLQACLGEKPRLLAIDTL 157
           I    L      E A+ + L    G  ++A+H+  D  FL+  L+A LG       +D  
Sbjct: 97  IGPEALTQGHEIEDALLYLLEWMNGDPILAYHSAFDQKFLEKTLKAQLGYTQPHTWMDVA 156

Query: 158 LLEKQRLLRQQEHLQEGCLRLGRSRARYGLPVYAAHNALIDALACGELLL 207
            L          + + G   L      +GL V   H+A  DALA  EL L
Sbjct: 157 DLMPAFF----PNTKTGGKGLDNWADYFGLEVSERHHAASDALATAELTL 202