Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 235 a.a., 3'-5' exonuclease from Bifidobacterium breve UCC2003

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 18/168 (10%)

Query: 42  ELLAIDLEMTGLNASFDQILSIGVVPIRQGQLILSEAQHKLVQIEGSVGQSATIHGILDT 101
           + +A+DLE TG   +   I  IG V +R G+ I+ + Q  +  +     Q   + GI D 
Sbjct: 33  DYVALDLETTGFYPNRCAITEIGAVRVRGGR-IVDQFQQLINPLCPIPRQITALTGITDA 91

Query: 102 ------HLDAALTPEQAMAWFL---SVSEGMVLVAHHAPLDLAFLQSGLQACLGEKPRLL 152
                  +D  L   Q ++W     + +E   +V H+   DL FL    +   G      
Sbjct: 92  MVADHDPIDGVL--PQFISWLADSNAAAETEPIVGHNVSFDLRFLDYNTRHIAGCGFACA 149

Query: 153 AIDTLLLEKQRLLRQQEHLQEGCLRLGRSRARYGLPVYAAHNALIDAL 200
             DT+ + +    +Q  H      RL     R+G+     H AL DA+
Sbjct: 150 DYDTMQISRALFPKQSHH------RLADLIVRFGIADNEEHRALSDAI 191