Pairwise Alignments

Query, 226 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella loihica PV-4

Subject, 244 a.a., DNA polymerase III subunit epsilon from Burkholderia phytofirmans PsJN

 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 11/170 (6%)

Query: 44  LAIDLEMTGLNA-SFDQILSIGVVPIRQGQLILSEAQHKLVQIEGSVGQSATIHGILDTH 102
           L +D E TGLNA + D+IL +G V +   +L  +     +     S   +  +HG+    
Sbjct: 4   LILDTETTGLNARTGDRILELGCVEMVNRRLTGNNLHFYINPERESDPGALAVHGLTTEF 63

Query: 103 LDAALTPEQAMAWFLSVSEGMVLVAHHAPLDLAFLQSGLQACLGEKPRLL----AIDTLL 158
           L       +    F    +   L+ H+AP D+ FL +   A LG  P        IDTL 
Sbjct: 64  LSDKPKFAEIADQFRDFIQDADLIIHNAPFDIGFLDAEF-ALLGLPPVKTYCGEIIDTLA 122

Query: 159 LEKQRLLRQQEHLQEGCLRLGRSRARYGLPVYAAHNALIDALACGELLLA 208
             KQ    ++  L   C R G S A   L     H AL+D+    E+ LA
Sbjct: 123 RAKQMFPGKRNSLDALCDRFGISNAHRTL-----HGALLDSELLAEVYLA 167