Pairwise Alignments

Query, 403 a.a., tryptophan synthase subunit beta (RefSeq) from Shewanella loihica PV-4

Subject, 394 a.a., tryptophan synthase subunit beta from Methanococcus maripaludis S2

 Score =  490 bits (1261), Expect = e-143
 Identities = 234/391 (59%), Positives = 307/391 (78%), Gaps = 1/391 (0%)

Query: 4   KLDPYFGEYGGMFVPQILMPALKQLEAAFVDAQNDPSFQAEFTDLLKNYAGRPTALTLTR 63
           K + YFGEYGG F+P++LMPA+ +L+ A+ + ++D  FQ E +  LKNYAGR T L    
Sbjct: 2   KCEGYFGEYGGQFIPEVLMPAIDELKEAYFELKDDEDFQNELSYYLKNYAGRETPLYYAE 61

Query: 64  NLSPN-PLVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALA 122
           NL+      KIYLKREDLLHGGAHKTN  +GQALLAKRMGK  IIAETGAGQHGV T++A
Sbjct: 62  NLTKKLGGAKIYLKREDLLHGGAHKTNNTIGQALLAKRMGKTRIIAETGAGQHGVGTSMA 121

Query: 123 CALLGLKCKVYMGAKDVERQSPNVFRMRLMGAEVIPVTSGSATLKDACNEAMRDWSASYD 182
            AL GL+ +++MG  D ERQ PNVFRM+L+GA+V PV +GS  LKDA NEAMR+W+A+++
Sbjct: 122 GALFGLETEIFMGRLDTERQQPNVFRMKLLGAKVTPVDTGSKVLKDAVNEAMRNWTATFE 181

Query: 183 KAHYLLGTAAGPHPFPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFA 242
             HYL+GT  GPHPFPTIVR+FQ +IG+E K QI+E+EGRLPD ++AC+GGGSNA+G+F 
Sbjct: 182 NTHYLIGTVMGPHPFPTIVRDFQSVIGKEVKKQIMEQEGRLPDHLVACIGGGSNALGLFH 241

Query: 243 DFIDEPSVKLIGVEPAGLGIDTPKHGAPLKHGKTGIFFGMKAPLMQDKEGQIEESYSISA 302
            FI +  V+++G+E AG G++T  HGA +  GK G+  GM +  +QD++GQIEE+YSISA
Sbjct: 242 AFIQDKDVRMVGIEAAGKGLNTSLHGASISKGKKGVLHGMLSYFLQDEDGQIEEAYSISA 301

Query: 303 GLDFPSVGPQHAHLAATGRATYESATDDEALAAFQLLARSEGIIPALESAHALAYAIKLA 362
           GLD+P +GP+HA+L  +GRA Y SATDD+AL+AF  L RSEGIIPALES+HA+AYAI+ A
Sbjct: 302 GLDYPGIGPEHAYLHDSGRAEYASATDDQALSAFMELTRSEGIIPALESSHAVAYAIENA 361

Query: 363 EAATEETLLVVNLSGRGDKDIFTVADILEKQ 393
               ++ ++V+NLSGRGDKD+ TV DI++K+
Sbjct: 362 GNMDKDEIMVINLSGRGDKDLNTVIDIMQKR 392