Pairwise Alignments

Query, 1113 a.a., DNA polymerase III, subunits gamma and tau (RefSeq) from Shewanella loihica PV-4

Subject, 608 a.a., DNA polymerase III subunit gamma/tau from Caulobacter crescentus NA1000

 Score =  266 bits (681), Expect = 3e-75
 Identities = 153/360 (42%), Positives = 216/360 (60%), Gaps = 8/360 (2%)

Query: 2   SYQVLARKWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAKG 61
           +Y VLARK+RP TFE ++GQ  ++  L NA S  R+ HA++ TG RGVGKT+ ARL A+ 
Sbjct: 55  AYTVLARKYRPRTFEDLIGQEAMVRTLANAFSTGRIAHAFMLTGVRGVGKTTTARLLARA 114

Query: 62  LNCEQGVTATPCGQCAS----CVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117
           LN E      P     +    C  I +GR +D++E+DAASRTKVD+ RELLD V+Y P  
Sbjct: 115 LNYETDTVKGPSVDLTTEGYHCRSIIEGRHMDVLELDAASRTKVDEMRELLDGVRYAPVE 174

Query: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKS 177
            R+KVY+IDEVHMLS ++FNALLKTLEEPP H KF+ ATT+ +++PVT+LSRC +F+L+ 
Sbjct: 175 ARYKVYIIDEVHMLSTAAFNALLKTLEEPPPHAKFIFATTEIRKVPVTILSRCQRFDLRR 234

Query: 178 LTLDEICVQLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIA-FGAGQ-VRLT 235
           +  D +      I A+E    +  A+ L+A+AA GS+RD LSL DQAI     GQ V  T
Sbjct: 235 VEPDVLVKHFDRISAKEGARIEMDALALIARAAEGSVRDGLSLLDQAIVQTERGQTVTST 294

Query: 236 QVQTMLGTIDEHHVIVLLKALCDGDVDLLMKVTGDVLSFGADPHEVLRSLLELLHQITLT 295
            V+ MLG  D    I L + +  G     ++    +  FGADP  V+  +L+  H   ++
Sbjct: 295 VVRDMLGLADRSQTIALYEHVMAGKTKDALEGFRALWGFGADPAVVMLDVLDHCHASAVS 354

Query: 296 Q-FAPSAAQL-SQYAEQIKAFAKQLRPEQVQLYYQLLLNGRQDLPHAPDPKSGLEMALLR 353
           +   P A  +  + A ++ A         +   +Q+LL    ++  APD  +  EMAL+R
Sbjct: 355 KALGPDALSMPKEQAARLAAIGAHTSAGTLSRLWQMLLKAHDEVRRAPDAMAAAEMALIR 414