Pairwise Alignments

Query, 879 a.a., signal transduction histidine kinase regulating citrate/malate metabolism (RefSeq) from Shewanella loihica PV-4

Subject, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 81.6 bits (200), Expect = 2e-19
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 11/149 (7%)

Query: 85  ETLANTIGI------VGETYRGQDEVVKELIPSLLDIGERHQLIAGGGIWPEPGMFGKQK 138
           E L N+IG+      +G++   ++E  + L      +G    +I  GG+WPEP +     
Sbjct: 61  EPLNNSIGVLQSLTSIGKSAADKEEQERMLRSLFSVVGG---VIISGGLWPEPNLSATDP 117

Query: 139 TR--NSFFWARDKHDEFQYLDNYNSAEGPGYHQAFWYLPAKYFQDGHTHWSKSYVDPYTK 196
           +   +S F+ +    +   L ++N+ +  GY +  WYL A+   +G   WS  YVDPYT+
Sbjct: 118 SLRYDSLFFNKATDGQVDQLSSWNNPKAGGYDRESWYLAAEREAEGLYFWSPVYVDPYTR 177

Query: 197 EVMITASVPMRADHSFIGVATVDIALRGL 225
             MIT S P   +  F GVATVD++L  L
Sbjct: 178 VEMITVSTPYYRNGQFAGVATVDLSLESL 206



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 27/120 (22%), Positives = 46/120 (38%)

Query: 358 LVSILTMAQTQWKIILVTPLSSLASQANAIALKIGAFLLLAQLIALLILFIFQHKLFIRP 417
           LVS  +  +  W+I +V     +      + + I   L+   L+ +++ +      +IRP
Sbjct: 243 LVSYYSFGEFNWQIEVVNANQHVDEIIFDLIINIEKGLMPILLLCVMVGYFLISHYWIRP 302

Query: 418 IFQIVSALQSGNLGRLELDANKRHDEVGQLAKAFIARSNQLEIAYASLDASNLALEQQLA 477
           I  I   +     G +     K  DE+  L   F  ++  LE       AS  A    LA
Sbjct: 303 IVLIAKKVSESREGEIIDIRYKSQDEIRHLIDTFNQKTIYLEAEKVKAQASTKAKSAFLA 362