Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  195 bits (496), Expect = 3e-54
 Identities = 124/355 (34%), Positives = 194/355 (54%), Gaps = 4/355 (1%)

Query: 148 SVVIISLVALIFVILLSSYYISTFVGGALYTNVMALKRAA--DGDLTGRLNFFEVKDEFS 205
           S +I   VA+  + LL S  I   +   L T   A++  A  +GDLT RL   + KDEF+
Sbjct: 274 SALIAMFVAVAAIALLLSLLIQVLMR-PLTTMGRAMQDIAQGEGDLTRRL-VVQGKDEFA 331

Query: 206 ILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQTLAAEQRQHLDSLATAME 265
           +L  S +  VER H  +S ++ A+ Q+  + Q    ++      + EQ    +S+A A+ 
Sbjct: 332 VLGGSFNQFVERIHASISEVSSATRQVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAIN 391

Query: 266 EMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIGDLANEIGDASTAVNTLND 325
           ++ AA +E+ARNA  +S     A++Q + G + +  T+QA+ +L+ +I  + T + TLN 
Sbjct: 392 QLGAATQEIARNAADASQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNA 451

Query: 326 NAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQAATVE 385
           +   I  ++  I  IS+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ +  E
Sbjct: 452 STDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEE 511

Query: 386 IKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKAIAHHSERVYEMSVLIATS 445
           I  MI +LQ GS      M  +   +++  +   + G  L ++      +  M+  +A +
Sbjct: 512 IHKMITSLQVGSREAVTTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAA 571

Query: 446 AEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHATAEQLDQLLVGLKV 500
            EEQ+AV   +  ++  I   +     + N+++  CD L   A +L QL+   K+
Sbjct: 572 TEEQTAVVETLNMDVSHINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626