Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  201 bits (511), Expect = 6e-56
 Identities = 131/364 (35%), Positives = 203/364 (55%), Gaps = 3/364 (0%)

Query: 139 LDQVLSSAQSVVI-ISLVALIFVILLSSYYISTFVGG-ALYTNVMALKRAADGDLTGRLN 196
           L+Q L+    V I I L  L+ + LL+S++++  +       N +A     DGDLT RL+
Sbjct: 277 LEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLD 336

Query: 197 FFEVKDEFSILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQTLAAEQRQH 256
               +DE  +LA   +  V+R HQ+V  + + S  +         +A +       Q+  
Sbjct: 337 V-RSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDE 395

Query: 257 LDSLATAMEEMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIGDLANEIGDA 316
           +  +ATA+ EM +A  E+A NAE ++    ++ Q  E G   +  + Q+I  LA E+  A
Sbjct: 396 ITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGA 455

Query: 317 STAVNTLNDNAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 376
              ++ L  +A +I  +++TI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+
Sbjct: 456 VRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLS 515

Query: 377 GRTQAATVEIKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKAIAHHSERVY 436
            RT A+T EI++ I  LQ  +     VM  + +  +     V +TG  L+AI+   +++ 
Sbjct: 516 QRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQIS 575

Query: 437 EMSVLIATSAEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHATAEQLDQLLV 496
           +M+  IA++AEEQS V  +I  N   +R  S  + + A QSV     LHA A++L++ + 
Sbjct: 576 DMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEIS 635

Query: 497 GLKV 500
             K+
Sbjct: 636 RFKL 639