Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (481), Expect = 2e-52
 Identities = 136/437 (31%), Positives = 216/437 (49%), Gaps = 11/437 (2%)

Query: 74  VPDDKAASFKQELVSAG-FADTQSSLNAKTSRLVHAGGGTLMQGDSLTAHSRASSANL-- 130
           VPDD  A +   L      A  Q+ L A   +        L+Q   + A   +S A L  
Sbjct: 224 VPDDVKARYIANLNRLQELALGQNGLLATMRKAQQLENALLIQNQQVDASLASSLAKLDD 283

Query: 131 -------VAKTEVTDLDQVLSSAQSVVIISLVALIFVILLSSYYISTFVGGALYTNVMAL 183
                  +A+      D  +SSA   ++        V L+  Y  +  +   L      L
Sbjct: 284 MAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHEL 343

Query: 184 KRAADGDLTGRLNFFEVKDEFSILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTA 243
              A GD+T R+N+   + EF  L+ SID L ++  +L+S++   S  +        + +
Sbjct: 344 AYMARGDMTRRINY-PTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEIS 402

Query: 244 QEGQTLAAEQRQHLDSLATAMEEMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITV 303
           +       EQ+   D +A A+ E+  +  EVAR+ + + +E   A+ + + G + +A T 
Sbjct: 403 ERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTR 462

Query: 304 QAIGDLANEIGDASTAVNTLNDNAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGR 363
           +    LA+++  A    + L + +  I  ++  I  I+EQTNLLALNAAIEAARAG+ GR
Sbjct: 463 RITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGR 522

Query: 364 GFAVVADEVRTLAGRTQAATVEIKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGE 423
           GFAVVADEVR LA RTQ +T EI+ MIE LQ  S  + +VM R+ E+ +   +   E   
Sbjct: 523 GFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDS 582

Query: 424 DLKAIAHHSERVYEMSVLIATSAEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDE 483
            L++IA     + EM+  +A +A+EQ  V+  +A ++  I   +H+ E+ A +S S  + 
Sbjct: 583 ALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEV 642

Query: 484 LHATAEQLDQLLVGLKV 500
           L   A +  QL+   KV
Sbjct: 643 LADLAAKQQQLIAHFKV 659