Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (473), Expect = 1e-51
 Identities = 114/356 (32%), Positives = 193/356 (54%), Gaps = 1/356 (0%)

Query: 137 TDLDQVLSSAQSVVIISLVALIFVILLSSYYISTFVGGALYTNVMALKRAADGDLTGRLN 196
           ++L +++ +     + S+VAL+  +   ++ ++  +   L   V      A+G+L  RL+
Sbjct: 179 SELTELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLD 238

Query: 197 FFEV-KDEFSILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQTLAAEQRQ 255
              +  DE   LA +   +      +V  +  +++Q+   V      +++       Q++
Sbjct: 239 RKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQE 298

Query: 256 HLDSLATAMEEMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIGDLANEIGD 315
            +  +ATAM EM + V EVARN E +S+ +++++Q    GS+ +     +I  +  EIG 
Sbjct: 299 EVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGR 358

Query: 316 ASTAVNTLNDNAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 375
               V  L   A +I+ VV  I+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L
Sbjct: 359 TEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 418

Query: 376 AGRTQAATVEIKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKAIAHHSERV 435
           AG+TQ +T +I  +I+ LQ  +    +    + E      +   ET + ++ I H S ++
Sbjct: 419 AGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQI 478

Query: 436 YEMSVLIATSAEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHATAEQL 491
            +M++ IA++  EQ +V+ E++ N+  I   +  V Q ++ +   C EL   A QL
Sbjct: 479 ADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQL 534