Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (480), Expect = 3e-52
 Identities = 118/373 (31%), Positives = 201/373 (53%), Gaps = 15/373 (4%)

Query: 134 TEVTDLDQVLSSAQSVVIISLVALIFVILLSSYYISTFVGGALYTNVMALKRAA------ 187
           T + D+D  +++A +  I+ +   + VI+        F+   +Y  ++ LK A       
Sbjct: 279 TALADVDVAVANAITTGIVLIGISVGVII--------FIINQIYKPLLRLKVAVLDLAQG 330

Query: 188 DGDLTGRLNFFEVKDEFSILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQ 247
            GDLT RL      D+ + ++   +        ++ +++ A+  I + ++   QTA+E +
Sbjct: 331 SGDLTRRLEV-NGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENE 389

Query: 248 TLAAEQRQHLDSLATAMEEMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIG 307
            +        D + TA+ +M+ + + VA +  QS+  T+ A+++ +     +   V  + 
Sbjct: 390 QMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVT 449

Query: 308 DLANEIGDASTAVNTLNDNAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAV 367
            L N++ + S +++ +N +A KI EV++ I AISEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 450 SLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAV 509

Query: 368 VADEVRTLAGRTQAATVEIKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKA 427
           VADEVR LA RTQ +T EI  M+  L  G+ ++   M+RT ++ Q       E    L  
Sbjct: 510 VADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNM 569

Query: 428 IAHHSERVYEMSVLIATSAEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHAT 487
           ++     + ++S  IA + E+QS VA E++ N++ IR     +  S  Q+V   + L  +
Sbjct: 570 MSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHS 629

Query: 488 AEQLDQLLVGLKV 500
             +L+QL+   K+
Sbjct: 630 NHELEQLVGKFKL 642