Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (514), Expect = 2e-56
 Identities = 126/368 (34%), Positives = 209/368 (56%), Gaps = 12/368 (3%)

Query: 141 QVLSSAQ---SVVIISLVALIFVILLSSYYISTFVGGALYTNVMALKRAADGDLTGRLNF 197
           Q+LSS +   S  + S +A++ +++L ++ ++  + G L   +      A GDL+  ++ 
Sbjct: 179 QILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDR 238

Query: 198 FEV-KDEFSILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQTLAAEQRQH 256
             +  DE   LA + + + +   QL+  +  A +Q+ + V+   Q + +      EQ+  
Sbjct: 239 SSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQ 298

Query: 257 LDSLATAMEEMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIGDLANEIGDA 316
           +  +ATAM +M AAV +VARN E S+++   AN + + G+++ A  V++I  +A+ IG+A
Sbjct: 299 ITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEA 358

Query: 317 STAVNTLNDNAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 376
              V+ L   +++I+ VV  I +I++QTNLLALNAAIEAARAGE GRGFAVVADEVRTLA
Sbjct: 359 GQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLA 418

Query: 377 GRTQAATVEIKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKAIAHHSE--- 433
           GRTQ +T EI ++IE LQ     + +  K   E+++      +E G   +++    E   
Sbjct: 419 GRTQDSTGEITTIIEKLQ----VMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESI 474

Query: 434 -RVYEMSVLIATSAEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHATAEQLD 492
             + ++   IA++  EQ +VA+E++ N+  I   S +V Q + Q+   C EL   A  L 
Sbjct: 475 ANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQ 534

Query: 493 QLLVGLKV 500
             L   K+
Sbjct: 535 DTLRRFKI 542