Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  191 bits (484), Expect = 9e-53
 Identities = 124/347 (35%), Positives = 194/347 (55%), Gaps = 4/347 (1%)

Query: 149 VVIISLVALIFVILLSSYYISTFVGGALYTNVMALKRAADGD--LTGRLNFFEVKDEFSI 206
           ++  +L+  + V+++ S+ +S F+   L     AL+  A GD  LT RL      DE   
Sbjct: 280 LITTALLITVIVVVIVSWLVS-FLFRDLGRVSKALEEIASGDADLTQRLEP-RSDDEVGQ 337

Query: 207 LAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEGQTLAAEQRQHLDSLATAMEE 266
           LA + +T V   H +V +++  S+ +    +     A+E  +    Q+  ++ +ATA+ E
Sbjct: 338 LASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINE 397

Query: 267 MTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAIGDLANEIGDASTAVNTLNDN 326
           M AA +E+A NA+ ++    EA      G+  +  T ++I  LA E+  A+  +  L  +
Sbjct: 398 MAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAH 457

Query: 327 AAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQAATVEI 386
             +I  +++TI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT A+T EI
Sbjct: 458 GHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEI 517

Query: 387 KSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLKAIAHHSERVYEMSVLIATSA 446
           + MIE LQ  +     +M  +   A        E    L+ I    ER+ +M+  IA++A
Sbjct: 518 QQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAA 577

Query: 447 EEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHATAEQLDQ 493
           EEQ++V +EI  N + IR+ S+D+ Q A+ +     EL   + +L+Q
Sbjct: 578 EEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQ 624