Pairwise Alignments

Query, 500 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (554), Expect = 5e-61
 Identities = 138/374 (36%), Positives = 206/374 (55%), Gaps = 6/374 (1%)

Query: 127 SANLVAKTEVTDLDQVLSSAQSVVIISLVALIFVILLSSYYISTFVGGALYTNVMALKRA 186
           S  L+   E     Q L    + +I++LV +   +++S   I       L T    +K+ 
Sbjct: 169 SGMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQP-----LDTIKDVMKKV 223

Query: 187 ADGDLTGRLNFFEVKDEFSILAVSIDTLVERQHQLVSRMTQASSQIRTVVQAFRQTAQEG 246
           A GDLT ++     KDE  I+A  I+  +   H  +    Q++S +         +A+E 
Sbjct: 224 AQGDLTAQIPVLG-KDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEET 282

Query: 247 QTLAAEQRQHLDSLATAMEEMTAAVKEVARNAEQSSNETQEANQQVEAGSKDIAITVQAI 306
                 QR  L  LATAM +MTA V +VA +AE ++ +T +A+++   G KD+  +V +I
Sbjct: 283 SQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSI 342

Query: 307 GDLANEIGDASTAVNTLNDNAAKIDEVVTTINAISEQTNLLALNAAIEAARAGEQGRGFA 366
             L+ E+G A+  VN L +   +I EV + I+ ISEQTNLLALNAAIEAARAG+QGRGFA
Sbjct: 343 RALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFA 402

Query: 367 VVADEVRTLAGRTQAATVEIKSMIEALQTGSHALTQVMKRTVEKAQDGKQHVLETGEDLK 426
           VVADEVR LA RT  +T EI++MI  LQ  + +    M+++   A +        G DL 
Sbjct: 403 VVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLS 462

Query: 427 AIAHHSERVYEMSVLIATSAEEQSAVANEIATNLMEIRNQSHDVEQSANQSVSGCDELHA 486
            I +H + V + +  IAT+AEEQSAVA E+  N+  I + + ++ Q+A       ++L  
Sbjct: 463 LIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLAD 522

Query: 487 TAEQLDQLLVGLKV 500
            + QLDQ L   K+
Sbjct: 523 LSRQLDQKLTAFKL 536