Pairwise Alignments

Query, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) from Shewanella loihica PV-4

Subject, 247 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas stutzeri RCH2

 Score =  104 bits (259), Expect = 2e-27
 Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 15/246 (6%)

Query: 1   MIIPAIDLIEGQVVRLYQGDYAQQTTFDLSPLAQLQAYQAQGATWLHIVDLTGAKDPDRR 60
           +IIPAIDL +G  VRL QG     T F   P+A    +   G   LH+VDL GA +    
Sbjct: 2   LIIPAIDLKDGACVRLRQGLMDDATVFSDDPVAMAAKWVEAGCRRLHLVDLNGAFEGQPV 61

Query: 61  QTRLIGELVENL-EANIQVGGGIRSEAQVKELLDLGVKRVVIGSLAVKQPELVQSWLETY 119
              ++  + +   +  IQ+GGGIR+   ++  +  GV  V+IG+ AVK+P  V      +
Sbjct: 62  NGEVVTAIAKRYPDLPIQIGGGIRTLETIEHYVRAGVSYVIIGTKAVKEPGFVTEACRAF 121

Query: 120 GSDAICLALDVNINQAGEKIVAVSGWQSGGGKTLESLVATFAPYGLKHALVTDISRDGTL 179
               I + LD     A +  VA  GW          L   F   G+   + TDI++DG +
Sbjct: 122 PGKVI-VGLD-----AKDGFVATDGWAEVSSVQAVDLARRFEADGVSAIVYTDIAKDGMM 175

Query: 180 QGSNTQLYQEI--VARYPDIEWQASGGIATLDDVSAVRNSGASGI---IIGKALLINNFT 234
           QG N +    +   +R P I   ASGGI  + D+  + ++   GI   I G+A+      
Sbjct: 176 QGCNVEATVALANASRIPVI---ASGGIHNIGDIQKLLDTNTPGIVGAITGRAIYEGTLD 232

Query: 235 VQEAIA 240
           V EA A
Sbjct: 233 VAEAQA 238



 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 25/89 (28%), Positives = 41/89 (46%)

Query: 155 SLVATFAPYGLKHALVTDISRDGTLQGSNTQLYQEIVARYPDIEWQASGGIATLDDVSAV 214
           ++ A +   G +   + D++     Q  N ++   I  RYPD+  Q  GGI TL+ +   
Sbjct: 34  AMAAKWVEAGCRRLHLVDLNGAFEGQPVNGEVVTAIAKRYPDLPIQIGGGIRTLETIEHY 93

Query: 215 RNSGASGIIIGKALLINNFTVQEAIACWP 243
             +G S +IIG   +     V EA   +P
Sbjct: 94  VRAGVSYVIIGTKAVKEPGFVTEACRAFP 122