Pairwise Alignments

Query, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) from Shewanella loihica PV-4

Subject, 241 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase from Methanococcus maripaludis S2

 Score =  123 bits (308), Expect = 4e-33
 Identities = 73/239 (30%), Positives = 129/239 (53%), Gaps = 6/239 (2%)

Query: 1   MIIPAIDLIEGQVVRLYQGDYAQQTTFDLSPLAQLQAYQAQGATWLHIVDLTGAKDPDRR 60
           ++IPA+D+   + V+L QG+  ++     +P    + +  +GA  LH+VDL GA D  R 
Sbjct: 2   LVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRV 61

Query: 61  QTRLIGELVENLEANIQVGGGIRSEAQVKELLDLGVKRVVIGSLAVKQPELVQSWLETYG 120
               I E+++     +Q+GGGIRS    + L++ G K+V+IG++AV+ PE+++   +  G
Sbjct: 62  NDEFIEEIIKKSGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRIG 121

Query: 121 SDAICLALDVNINQAGEKIVAVSGWQSGGGKTLESLVATFAPYGLKHALVTDISRDGTLQ 180
           S+ I ++LD     A +  V + GW+     T   +       G    L T++  +G L 
Sbjct: 122 SEKIMVSLD-----AKDGKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLN 176

Query: 181 GSNTQLYQEIVARYPDIEWQASGGIATLDDVSAVRNSGASGIIIGKALLINNFTVQEAI 239
           G N +  +E+V     I   ASGG+ T+DD+  ++  G  G+++G A+  N   +++AI
Sbjct: 177 GINIEPTKELVDNL-KIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAI 234