Pairwise Alignments

Query, 641 a.a., helicase c2 (RefSeq) from Shewanella loihica PV-4

Subject, 714 a.a., ATP-dependent DNA helicase DinG from Klebsiella michiganensis M5al

 Score =  146 bits (368), Expect = 4e-39
 Identities = 179/699 (25%), Positives = 295/699 (42%), Gaps = 107/699 (15%)

Query: 11  QVFAPDGSLSRHIKGYSCRVQQQTMATRVSETL--QKGDNLVVEAGTGVGKTYAYLVPAL 68
           Q+ A   +L   I  +  R  Q+ M   V++TL  ++G +L +EA TGVGKT +YL+P +
Sbjct: 10  QIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGI 69

Query: 69  LSGKQ----VIVSTGSKNLQEQLFFKDLPALLNIL-GIRPKVALLKGRSNYLCQYLMEKQ 123
              ++    ++VST +  LQ+Q++ KDLP L  I+  +R   A   GR  Y+C   +   
Sbjct: 70  AIAREEQKTLVVSTANVALQDQIYSKDLPLLRKIIPDLRFTAAF--GRGRYVCPRNLAAL 127

Query: 124 LSGVEVNDGKI--LDDLLRIDQWASQ----TVDGDIGS-----LYAVPENSPAIPL---V 169
            S        +  LDD L  +  A Q    T+  D+ S     L    + +    L   +
Sbjct: 128 ASTEPTQQDLLAFLDDELTPNNQAEQKLCATLKADLDSYKWDGLRDHTDKNVDDSLWSRL 187

Query: 170 VSSKESCIGKACDHYEACFTRKARAKALDAKIIVVNHHLFFA----DRILKETGFAELLP 225
            + K SC+ + C +Y  C    AR +  +A+++V NH L  A    + +L E       P
Sbjct: 188 STDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPE-------P 240

Query: 226 DSDVVIFDEAHLLPDIA-----------VTYFGQQLSI--KSLIRLLERFNELYRTQMAD 272
              +++ DE H LP++A             ++  QL +  K +   +E+F       +A+
Sbjct: 241 KHLLLVLDEGHHLPEVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTTPPLAN 300

Query: 273 SPQIGAMTARCHTQLLHWQGLLF----ATEERDWRRLIGD-----KALMEASWALVSELT 323
             ++       +  +     +L     A +E + R  +G+       + +    L   L 
Sbjct: 301 PERLNGHCEELYELISSLNNILNLYMPAGQEAEHRFPMGELPAEVMEICQRLAKLTETLR 360

Query: 324 AYRTMLLGYLGRNEAFDDGVEKIDGLL------------SKLTVFIQCDNPDSAYSIDY- 370
               + L  LG      D V     LL            SKL           A    + 
Sbjct: 361 GLAELFLNDLGEKTGSHDVVRLHRVLLQMNRALGMFESQSKLWRLASLAQSSGAPVTKWV 420

Query: 371 ------GYQHLTLRISPIKVAKECQSLFSPDVSWIF-TSATLQINRDLSLFTKAMGL-EK 422
                 G  H+      I+V+++ + L    V  I  TSATL+     S   +  GL E+
Sbjct: 421 TRDLRDGQMHIWFHCVGIRVSEQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEE 480

Query: 423 ANTSI--LDSPFDYRRQSLFCVPR------------HLASVTSQERAARQLVEVAVKAIN 468
           A      LDSPF++  Q    +P+            H+A + +  R   +  +     + 
Sbjct: 481 AGDRFVALDSPFNHVEQGKIVIPQMHYEPLIDNEEQHIAEMAAYFREQVESKKHLGMLVL 540

Query: 469 AAKGRTFMLFTSHRM-LNLVAVMLQGRIDYPLLVQGQAGKQTLLKKYRQL----GNAVLL 523
            A GR    F  H   L L+           LLVQG   +  L++ +R+       +VL+
Sbjct: 541 FASGRAMQRFLEHVTDLRLL-----------LLVQGDKPRYRLVELHRKRVEGGERSVLV 589

Query: 524 GTGAFWEGVDVRGKLLSCVIIDKLPFVSPDDNLYKARADGVQREGKDPFMTLSLPQAVIA 583
           G  +F EG+D++G+LLS V I K+ F   D  +     + ++   + PF   SLP A   
Sbjct: 590 GLQSFAEGLDLKGELLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFN 649

Query: 584 LNQGVGRLIRDEKDRGVLILCDNRIVNRPYGQAFINSLP 622
           L Q VGRLIR     G +++ D R++ + YG+  +N+LP
Sbjct: 650 LIQQVGRLIRSHSCWGEVVIYDKRLLTKNYGKRLLNALP 688