Pairwise Alignments

Query, 305 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 303 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 19/295 (6%)

Query: 21  QAVMMALGSAILMGTIGALARTANLEASIITFYRL--LIGAACLIAYMLATGKARQI--- 75
           +A+ + L S +L  T+    +    E + +    +  ++ A  L+    A  K + I   
Sbjct: 5   RALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKLIVPT 64

Query: 76  -LHRPGKRHLFNGAMLAGFMVFYVQSIGYINMANAVMLIYLAPLVSAIGAHFLFHERLTR 134
            L  P    L        + +   ++   +  + A  + Y   +   + A     +R+ +
Sbjct: 65  LLANPFYYLLLGLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQRIRK 124

Query: 135 QDLLAIGIALIGVVAILPSLESLTGSTAELKGYGFALLALLSYSGFMLINRRPASASPYQ 194
           QD +A  ++ +GVV I    + L        G G ALL+ L ++G+ ++N +   A P  
Sbjct: 125 QDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKN-KADPIV 183

Query: 195 STLIQLSFGALCLLPFAL----HQAV-MPSLTQWFWLAL--IGVFPGFLAILFAVKALR- 246
             L+    G L  +PFAL    H+ +    +T   WLA+  +G+F   +  +  + AL+ 
Sbjct: 184 GVLL----GFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKN 239

Query: 247 VLPAATFGTLAYIEPVTVVILGWSLFAEHLTPMQLMGCGLIICAGLIQTRKRRRA 301
               A    L +  P   + L  ++  E + P  L+G  LII   ++Q  + R+A
Sbjct: 240 TQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKA 294