Pairwise Alignments

Query, 329 a.a., putative transglycosylase (RefSeq) from Shewanella loihica PV-4

Subject, 454 a.a., Lytic murein transglycosylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  135 bits (339), Expect = 3e-36
 Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 24/327 (7%)

Query: 13  ANGLLLTSPLQAQESALS-------YDQYLSELKQQAVEQGIAQGTIDAVFDQIKLFKKA 65
           A G+   SP+ A  +ALS       + Q+L  ++ +A+  GI++ T+D+   + ++  + 
Sbjct: 54  APGMAPVSPI-APAAALSPAAEQAAFAQWLVGMRAEALAAGISRATVDSALGRARIEPRI 112

Query: 66  MV---NEPAANGPQNGPQNLDTYLPERVSEALVEQARGLYRDNKALFDRLGKEYGVQPRF 122
           +     +P  N      + L  Y    + ++ + +AR +   +  L   L + YGV  RF
Sbjct: 113 VELDRKQPEFN------KTLAGYFASTLPDSRIAKAREMMALHAPLLRSLEQRYGVPGRF 166

Query: 123 ILAYWGIASAFDASDYPALTVIASNAYHSDGQDAAF-----LAALKLMERDQLSFDSLKS 177
           ++A+WG+ + F  +      V A +    +G+  AF     L AL++++   +S D++  
Sbjct: 167 LVAFWGLETNFGGTLGSFRVVDALSTLAFEGRRGAFFRAQLLDALRIIDAGHVSADAMIG 226

Query: 178 DASGLMGYPHFTPKQLAKYGKDGNGDGKVDIWQNLADAFATTANYLKQLGWDYDGTWGRQ 237
             +G MG   F P     +  D +GDG++DIW +L DA A+ A YL  LGW     WG +
Sbjct: 227 SWAGAMGQTQFMPSTFRAHAVDYDGDGRIDIWGSLPDALASAAKYLSDLGWKGAEPWGWE 286

Query: 238 VKSPSELPKDLVGLEVHKGFDQWQALGVRRFNGSDL--PSRKDMQVSLIRPDGKGGRSYL 295
           V  P+ L    VGLE  +    W ALG+R  +G  L   +R  +  +L+ P G  G ++L
Sbjct: 287 VVLPAGLDLARVGLEERRPLADWAALGLRGADGRALGAGARAGVTAALLLPAGYRGPAFL 346

Query: 296 VYDNYRVLRQTQASDHLTLAVTYLSER 322
           V DNY  + +   S    LAV  L++R
Sbjct: 347 VTDNYFSILKWNRSMLYALAVGLLADR 373