Pairwise Alignments

Query, 578 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 463 a.a., Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases from Sphingomonas koreensis DSMZ 15582

 Score = 55.5 bits (132), Expect = 5e-12
 Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 30/224 (13%)

Query: 49  APKISALADRVAQYALNTYGDETISALSTLIPFKTVETEGMTPLTHPEFI-------GFK 101
           A  ++A     AQ A      + +  L   I F+TVE  G     +  ++       GF 
Sbjct: 9   AMTVAAAGVAHAQKAAPEADAQALELLKRAIAFRTVEGPGNQTPDYANYLRDALIAGGFA 68

Query: 102 AQLKSLSQSLGLDYSDQGYVVLIGLGEGE----QKLGVITHGDVQPADASFWQQDPFTLD 157
           A+  ++ +       D   +V    G  +    + +G+I H DV  AD   W++DPFT  
Sbjct: 69  AEDVTVER-----LGDTAMLVARYRGTAKPGTAKPIGIIGHMDVVAADPKDWERDPFTPV 123

Query: 158 SQSQPGFLIGRGTEDDKGAIVTAMYAMKAIKDKGLALNRRIELLVYLAEESDWAPLKAFL 217
            ++  G++ GRG+ D+K ++   + A+  +K  G    R I  +    EE++     A  
Sbjct: 124 IEN--GYIFGRGSTDNKFSVSAMVAALIQLKKDGFKPRRDIIFMGSGDEETEMKTTAALA 181

Query: 218 TDFTPADINITIDA------------EYPVVTAEKGWSEIRLTI 249
             +T  ++ + IDA             Y +  AEK +++  LT+
Sbjct: 182 EKYTGLELLLNIDAGGGRYSPEGKAEYYGLQAAEKTYADFILTV 225