Pairwise Alignments

Query, 386 a.a., homogentisate 1,2-dioxygenase (RefSeq) from Shewanella loihica PV-4

Subject, 378 a.a., homogentisate 1,2-dioxygenase from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (423), Expect = 5e-46
 Identities = 104/297 (35%), Positives = 153/297 (51%), Gaps = 14/297 (4%)

Query: 94  IFFNNDVAMYSAKVTEATEEFYRNAYADEVIFVHEGQGKLYSEYGVLDVKKWDYLVIPRG 153
           +  N++V +   K+ +A     RNA  DE++F+H+G+  LY +YG + V + DY +IPR 
Sbjct: 84  LLHNHEVKVRVWKLEQAMPALARNADGDELLFIHQGKADLYCDYGHMVVSEGDYALIPRS 143

Query: 154 TTYQLKFDDYSQVRLFVIEAFSMVEVPKHFRNEYGQLLESAPYCERDIRVPSLQEAV--- 210
           T ++L  +    + + +IE         +   E G +   A +    + VPS+ +     
Sbjct: 144 TNWRL--EPIEPLFILMIENTDAA----YALPEKGLVGNHAVFDPAVLDVPSINDQFRAQ 197

Query: 211 -VEKGAFPLVCKFGDKYQLTQLEWHPFDLVGWDGCVYPWAFNIQDYAPKVG-QIHLPPSD 268
             E+     V + G    +T   ++P D VGW G +     N +D  P +  + HLPPS 
Sbjct: 198 YSEQQTQVQVKRHGQLSTIT-FPFNPLDAVGWHGDLSVVRLNWRDIRPLMSHRYHLPPSA 256

Query: 269 HLVFTAHNFVICNFVPRPYDFHPQSIPAPYYHNNIDSDEVLYYVDGDFMSRTGIEAGYMT 328
           H  F    FV+C FVPRP +  P ++  P+YHNN D DEVL+Y  GDF SR  IEAG +T
Sbjct: 257 HTTFVGQGFVVCTFVPRPIESDPGALKVPFYHNNDDYDEVLFYHAGDFFSRDNIEAGMVT 316

Query: 329 LHQKGVPHGPQPGRTEASV--GKKETYEYAVMVDTFAPLQLTQHVQGCMSKDYNRSW 383
            H  G  HGP P   +A +   KK T E AVM+DT   LQ +   Q   ++ Y  SW
Sbjct: 317 FHPAGFTHGPHPKAFQAGLEYRKKFTDEVAVMIDTRHALQFSDAAQQVENRQYVYSW 373