Pairwise Alignments

Query, 308 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 303 a.a., 1-aminocyclopropane-1-carboxylate deaminase from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (712), Expect = 9e-80
 Identities = 153/310 (49%), Positives = 197/310 (63%), Gaps = 17/310 (5%)

Query: 1   MKLSHTPVEAVCLGEHKVYVKRDDLLHPEFSGNKARKFAYFLENDFPSVRQLIGYGSPQA 60
           M ++ +P+          Y+KRDD LHP FSGNKARK    LE DFP +  LI YGS QA
Sbjct: 1   MLITQSPITEHRFAGQTFYLKRDDKLHPHFSGNKARKLMALLEGDFPGITTLISYGSAQA 60

Query: 61  NSLYSLSALAKLKGWRLDFYVDHLPSYLTEHPCGNYLAALDNGANIID---LSRKTDRDG 117
           NSLYS +ALAKL+GWRL+FYVDH+P++L  +P GNY  AL+ GA II+   L  K  R+ 
Sbjct: 61  NSLYSFAALAKLRGWRLEFYVDHIPAWLKSYPIGNYRGALELGATIIETRSLGAKHPRE- 119

Query: 118 LDSEAYIRQRVLTGSDEQLFVPEGGRCAFAEPGVAQLAREIASWKSAQPLNELVVFLPSG 177
                +I+Q+ +  +D  L + EG R  FAEPG+ QLA E+  W   Q   + VV LPSG
Sbjct: 120 -----FIQQQRMPNTD-CLVIEEGARSPFAEPGIKQLALEMLEWLRHQTQPDWVVALPSG 173

Query: 178 TGTTALYLQKQFLAIDP-SISVMTCAVVGGDEYLKKQFLALEQDEALHPQIVPAAKRYHF 236
           TGTTALYL K    + P  + V+TC  VG + YL++QFL L   E  HP ++ +  +++F
Sbjct: 174 TGTTALYLHKY---LQPHGVEVITCPCVGDESYLREQFLML--GETSHPTVLTSTTKHYF 228

Query: 237 GKLYPEFYQMWHE-LESTGIAFELLYDPLGWLCLKQLWQQGLAAPVLYLHQGGLLGNQSM 295
           G LYPE YQ+W   L  T I F+LLYDPL W  L     +     +LYLHQGGLLGN+SM
Sbjct: 229 GHLYPEDYQIWQALLAQTHIEFDLLYDPLMWRLLSAWRTENPDRNLLYLHQGGLLGNESM 288

Query: 296 LPRYRRKFGE 305
           LPRY+R+F E
Sbjct: 289 LPRYQRQFSE 298