Pairwise Alignments

Query, 537 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 75.5 bits (184), Expect = 5e-18
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 5/150 (3%)

Query: 326 RVIFVIMAVLLWLEHLGFNASAIIAGMGIGGIAIALASKQSIENFIGTITLYSAAPIKVG 385
           +V++VI  +L+ L  +G N + ++ G GI G+ I  A + ++ NF   + L    P  VG
Sbjct: 351 KVVWVI-GILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVG 409

Query: 386 NLCKFGSISGTVEEIGLRCTQIRTLDRTLIHVPNAKLVEMEIENISQREKIRFKADIRLD 445
           +    G + G V  + L  T IRT D  +I VPN+K+    I+N++  E+IR    + + 
Sbjct: 410 DFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVT-HERIR---RVDMV 465

Query: 446 YAVTTSEQLKAIVAEIKAMLEEHELVLKEP 475
           + +  S+ L    A +  +++ H  VLK P
Sbjct: 466 FGIGYSDDLLKAEAVLTDIVKSHPAVLKTP 495