Pairwise Alignments

Query, 537 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

Subject, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 39/165 (23%), Positives = 84/165 (50%), Gaps = 4/165 (2%)

Query: 311 KDQAASLLRPLTNFLRVIFVIMAVLLWLEHLGFNASAIIAGMGIGGIAIALASKQSIENF 370
           K+   +++  +   +R    I+ ++  L  +G   ++++A +G  G+A+ LA + S+ NF
Sbjct: 65  KEMDKAVVDFIHGLVRYTLFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNF 124

Query: 371 IGTITLYSAAPIKVGNLCKFGSISGTVEEIGLRCTQIRTLDRTLIHVPNAKLVEMEIENI 430
              + + +  P K G+  + G ++G+V+ I +  T +++ D  ++ VPN+ ++   I N 
Sbjct: 125 AAGVLIVAFRPFKSGDYVEIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNY 184

Query: 431 SQREKIRFKADIRLDYAVTTSEQLKAIVAEIKAMLEEHELVLKEP 475
           S+ E  R    I + Y       L+     ++  LE+   +LK+P
Sbjct: 185 SRHETRRVDMVIGVSY----KSDLQKTKRVLRETLEKDPRILKDP 225