Pairwise Alignments

Query, 537 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

Subject, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 70/308 (22%), Positives = 137/308 (44%), Gaps = 10/308 (3%)

Query: 191 VNHIPEGRWFNVNLWEWTLLLAYLITAFLVMVPITWIIKRVILLTQ--YELKEELAYIVA 248
           + ++    ++ ++ +    L+  ++    V   I   +K++   T+  + L EE A +++
Sbjct: 6   LEYLQNSFFYGLSYYSGLKLILVVVIGLFVSYFIEKRVKKISETTKQTWILNEETAGLIS 65

Query: 249 GPLRLLAAVLLVRAWVSHSSISPAAIEMIDTGFLLVSAIIWFGWSAMGIFQQGLKKRWKE 308
             +  +  VL +    S  +      ++    + L+  II+F +      ++ L  +  +
Sbjct: 66  TFVLAIFVVLALNVIESFVTYQLFGFDLKILTYSLL--IIYFTYRISNRSKRYLLLKGSQ 123

Query: 309 QGKDQAASLLRPLTNFLRVIFVIMAVLLWLEHLGFNASAIIAGMGIGGIAIALASKQSIE 368
           +GK     L   + ++  +I     V   L       + ++AG GI GI +  AS+  + 
Sbjct: 124 EGKFAEYRLKATVFHYSAMIIAFGIVFQMLGLTSKLGTLLVAG-GITGIILGFASQTVVA 182

Query: 369 NFIGTITLYSAAPIKVGNLCKFGSISGTVEEIGLRCTQIRTLDRTLIHVPNAKLVEMEIE 428
           NFI  I LY   P+K+G+  + G+ SG V +I +  T+IRT D  L+ +PN K+   EI 
Sbjct: 183 NFISGIFLYFDKPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIV 242

Query: 429 NISQREKIRFKADIRLDYAVTTSEQLKAIVAEIKAMLEEHELVLKEP-LRVTFKGFGLHG 487
           N  +    R    + + Y     E  +  +  I  +LE    VL EP  ++     G   
Sbjct: 243 NNKKYPARRVDIVVGIAY----KEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSS 298

Query: 488 LQVNVLAY 495
           + ++V A+
Sbjct: 299 VDISVKAW 306