Pairwise Alignments

Query, 537 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

Subject, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score =  142 bits (358), Expect = 2e-38
 Identities = 82/206 (39%), Positives = 126/206 (61%), Gaps = 5/206 (2%)

Query: 312 DQAASLLRPLTNFLRVIFVIMAVLLWLEHLGFNASAIIAGMGIGGIAIALASKQSIENFI 371
           DQ   L+R L  FL    +I  ++L L ++G+N SA++AG+GIGG+A+ALA+K +IEN I
Sbjct: 130 DQLVPLMRKLVKFL---ILIAGLMLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLI 186

Query: 372 GTITLYSAAPIKVGNLCKFGSISGTVEEIGLRCTQIRTLDRTLIHVPNAKLVEMEIENIS 431
               +    P K+G+  K+G   G VEE+G+R T++R+   TLI VPNA +V+ EIEN S
Sbjct: 187 AGFIIIVDRPFKLGDWIKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFS 246

Query: 432 QREKIRFKADIRLDYAVTTSEQLKAIVAEIKAMLEEHELVLKEPLRVTFKGFGLHGLQVN 491
           +R K + KA I L Y  T  E++K     I+ +L +H  V+ +P+RV+F  FG   L + 
Sbjct: 247 ERRKRQVKATIGLTYD-TPVEKVKRAKEIIENVLNDHHGVV-DPIRVSFVEFGSFSLDLR 304

Query: 492 VLAYIGTKSFPTFQLASEELHLKIMD 517
           V  ++    F  F    +E+++KI +
Sbjct: 305 VEYFVRDFGFDFFLNTKDEINIKIKE 330