Pairwise Alignments

Query, 567 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) from Shewanella loihica PV-4

Subject, 539 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase from Escherichia coli Nissle 1917

 Score =  110 bits (276), Expect = 1e-28
 Identities = 130/544 (23%), Positives = 221/544 (40%), Gaps = 80/544 (14%)

Query: 44  TVLHTNDNHGRFWENK-----DGEYGMAARKTLIEKIRAEVAANGGETLLLSGGDINTGV 98
           T+++TND H      K     DG+  +     +   ++ E A N   T     GD  TG 
Sbjct: 27  TIIYTNDLHAHVDSYKVPYVADGKRDIGGFANISTLVKQEKAKNKA-TFYFDAGDYFTGP 85

Query: 99  PESDLQ--DALPDFLGMNDIGYDAMAVGNHEFDNPLAVLDSQRSIANFPMLAANIYKEDG 156
             S L   +A+ D   MN + +DA+++GNHEFD+       Q S ANFP+L  N+Y ++ 
Sbjct: 86  YISSLTKGEAIIDI--MNTMPFDAVSIGNHEFDHGWDNALRQLSKANFPVLLGNVYHKES 143

Query: 157 TRYF--EAYKVFDVNGIKIAVIGL--------TTEDTAKLG-----NPEF--------IS 193
            + F  + Y + + +GIKI ++GL        T  + +  G     N  F          
Sbjct: 144 EKPFWNKPYTILEKDGIKIGIVGLHGVFAFNDTVSELSLQGLDNDNNNRFDKSSATLKNQ 203

Query: 194 GLKFTDPKEEIVKVIKEIKDAKAADLIFATTHMGHYANGEHGSNAPGDVALAKALEQGQ- 252
           G++  D  + +   I E++D    DL  A  H G  A      N     AL K ++    
Sbjct: 204 GIEARDEVKYLQHYIDELRD--KVDLTVALVHEGVPARQSSIGNTDVRRALDKDIQTASK 261

Query: 253 ---LQAVIGGHSQNPVCMEGGEYADFAPGDECTPDQQNGTYIMQAHEWGKYVGRADFEYF 309
              L  +I GH               A      P +   T I+     G  +G+      
Sbjct: 262 VKGLDILITGH---------------AHVGTPEPIKVGNTLILSTDSGGIDIGKL----- 301

Query: 310 NGELHLANYKLVPVNLVKKVKDEQGNETKVLVGEAIEADAALKEMLSYYQERGQGQLDEV 369
                     ++ VN   +    +  E K +  +    D   +++++ + ++    L ++
Sbjct: 302 ----------ILDVNPTARTHKVKSFELKTVYADEWIPDPTTQKVINGWNKK----LADL 347

Query: 370 IASTDGLLDGERANVRYMQTNLGRLIADAQRTKV-AADVGVMNSGGVRASIEAGDISYRD 428
           +    G             + LG L  DA       A + ++NSG +RA I AG I++ D
Sbjct: 348 VRQPVGESSIALTRAYGESSQLGNLFTDAMLVAAPTAQIALINSGSLRADINAGTITFGD 407

Query: 429 VLTVQPFGNMVTLSTMTGEELSAYLGEVASLQIGAGAYAQITGVKMTVD-CAAKTVAISE 487
           + +  PF N +T   ++G++L   L   ASL  G    ++   ++ T+     + +   +
Sbjct: 408 ITSTFPFKNELTEMDLSGKDLRNLLEHGASLTNGILQMSKGAEMRYTLQKPVGQRIVSFK 467

Query: 488 VNGKEYSATGSYTMTVPSYNAAGGDGY-----PKLNPVQTGYVDAEVLYTFFKDAGTIVA 542
           +NG+E   T  Y +   ++ A GGDG+      K   V+ G   + V+  +FK    I  
Sbjct: 468 INGEEIVDTNIYHVATTTFLALGGDGFLAFKEGKNVQVRAGNNMSNVVIDYFKKGHKITP 527

Query: 543 ADYN 546
           A  N
Sbjct: 528 AQVN 531