Pairwise Alignments

Query, 1192 a.a., exodeoxyribonuclease V, gamma subunit (RefSeq) from Shewanella loihica PV-4

Subject, 1099 a.a., exodeoxyribonuclease V, gamma subunit from Pseudomonas stutzeri RCH2

 Score =  559 bits (1441), Expect = e-163
 Identities = 416/1209 (34%), Positives = 592/1209 (48%), Gaps = 155/1209 (12%)

Query: 1    MLYLVQSNRMEALAELLANELQTPLPGQSPLSNEQILVQSPGMSTWLRLAIAKQNQVAAA 60
            ML L  +  +E L EL    L  PL    P +   ++V S GM  WL L +A++  +A  
Sbjct: 1    MLSLYHAPDLETLGELATRLLAQPLA--DPFAPALVVVPSQGMGRWLTLELARKQGIAMQ 58

Query: 61   LEFPLPSSFIWQLCHQLLPDVPKENAFTKPAMTWKLMELLPGLLSQEVFAPLANYLKDDA 120
            LE  LP+ F+W L   +L  +P+++AF+   +TW+L   L    + E+   LA YL    
Sbjct: 59   LEIQLPAKFVWDLSRTVLGSLPEQSAFSPTTLTWRLYGWLCEPANLELAPRLAQYLDGG- 117

Query: 121  ILTDSAAPHSLKLFQLCSQIADIFDQYLVYRPDWILAWEQGEDRLPPKERPLDANQQWQS 180
                       +   L ++IAD+FDQYL+YR DW+ AWE+GE         L  ++ WQ+
Sbjct: 118  --------DERRRLSLAAKIADVFDQYLLYRDDWLAAWERGETF------DLGPDEAWQA 163

Query: 181  LLWRELIHYNHHTLNQSRYHRANLHQALFDAL-SDPLCDLSKLPPRLFVFGISSMAPQTL 239
            LLWREL    H        HRA L   L   L SD    L  LP RL VFGISS+ P  L
Sbjct: 164  LLWRELTKDGHP-------HRARLLGDLLQRLYSDE--PLPGLPERLLVFGISSLPPHHL 214

Query: 240  EVLYFLAKRIDVVMLNLSPCQHYWGDIVDPKLRARMALQYGDKQQLAIDWESKLEVGNPL 299
             VL  LA+ IDVV+  L+P +  WG+I D +  AR      D      DW   L+VG+PL
Sbjct: 215  RVLDGLARHIDVVVCALNPSREAWGEIRDIRELARQPESGAD------DWY--LDVGHPL 266

Query: 300  LANNGKMGRELLDLILELPENDTNFNFECY---QDPGSNSLLHGVQQDILELCTRGETLG 356
            LA+ GK GR+  D +  L  ++ +  F  Y   +D   +SLLH +Q DIL L TR     
Sbjct: 267  LASLGKQGRDFFDSLFSLTASEGSQEFGLYSEDEDLRDDSLLHALQNDILRLRTRQ---- 322

Query: 357  PDAELYLTTKGRRVLKIDDDSLTLRSCHSPLRELETLHDHLLEQLSQSDGLAPKDIVVMM 416
            PD  +        VL  +D SL +   HSPLRE+E LHD LL + + +  L P  +VV+ 
Sbjct: 323  PDERI--------VLAENDRSLEVHIAHSPLREVEILHDQLLARFATNPALTPDQVVVLT 374

Query: 417  PDVAAYAPYIDAVFASKRGDHFIPYAIADRGAAQESPLINSFLHLLGLNKSRFALTDILG 476
            PD+  YAP+I+AVFA + G   IPY++ADR    E PLI +FL LL L +SRF   ++L 
Sbjct: 375  PDIERYAPFIEAVFAPREGSPRIPYSLADRSLRAEMPLIEAFLELLMLAQSRFTAEEVLA 434

Query: 477  ILEVPAVMRRFDLDDDDLLLIRRWLEQAGVRWGRDQHSRQAQQLPAFEHNSWAFGIKRLI 536
             LE PA+ RR  ++ +DL L+R WL  AGVRWGRD   R    LP     +W  G+ RL+
Sbjct: 435  WLEQPAIARRAGIESEDLPLLRDWLRDAGVRWGRDGSQRARLGLPDESAFTWRQGLDRLL 494

Query: 537  LGYS-----FSDEAPIYHDSLALPGVEGQSAQALGKLLNFIEAIDEFNLALGEHCPLSVR 591
            LG++       D AP+  +   L  +EG   Q LG+L+ F+E +      L    PL+  
Sbjct: 495  LGFAAPPQLAGDHAPLLGEHWPLDALEGARGQLLGRLVEFVERLGVLADQLARPRPLAEW 554

Query: 592  ITQLQTLVETFYDCVDEELSQKQELLQ-AITRLSEELTATQYQSELELEVMQNWFTRHLT 650
               LQ L++T +D  + E      LL  A   L ++  A      +ELE++    +  L 
Sbjct: 555  ADDLQILIDTLFD--EREAGDTLLLLSLACAALRDQAQAADLTRPIELELVHQQLSAALQ 612

Query: 651  ESRVGQRYLAGSVNFCTLMPMRSIPFMLVCLLGMNDGVYPRVQHPVGFDLVAQEGPRKGD 710
            +      +L G+V FCT++PMRS+PF +VCLLG++DG +PR   P GFDL+ +  PR+GD
Sbjct: 613  QGGGASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGFDLIGRH-PRRGD 671

Query: 711  RSRRLDDRYLFLEALLSAREQLYISYIGHSERDNSERIPSMLVSELIEYCQL-CYLPENC 769
            R+RRLDDRYL LE LLSARE LY+SY+G   RDN+   PS+L+SE++E   +   LP   
Sbjct: 672  RARRLDDRYLLLETLLSAREALYLSYVGRDPRDNAVLPPSVLLSEVLEAVDMTAELPVAQ 731

Query: 770  AHLLKGSNADDTSTADIAKIELAILDQLIITMPLQPFDERLYLADESEGAECEGAKSEPR 829
            A    G +   T++            ++++  PLQPF  R +     +G  C G      
Sbjct: 732  ASEHTGESVPKTAS-----------QKILVAHPLQPFSPRNF----GDGL-CTG------ 769

Query: 830  RLRQSYSEQWCPRALTEQDKQHDGEQGAKPASAGHFIEAP-------LSLVADEDKG-EP 881
                 +S  W                     +AG   E P        SL+A+ D+    
Sbjct: 770  -----FSSPWF-------------------RAAGRLAEPPQTQPQPFASLLAEPDEAWLT 805

Query: 882  LELSALIRFYRNPAQYFFNRTLKLDLNLSIQADENDEPF-----ALNPLSRYQLQSTLIE 936
            +E S L++ +R+PA++   + L L L    ++  +DEPF     A N L R  LQ+  +E
Sbjct: 806  IEPSQLLQCFRHPARFLLEQRLGLRLADDQESLASDEPFDLEMPAWNGLRRLSLQA--ME 863

Query: 937  DAVKSGDERPSSELLERLRLSGQLPLAPFDDLLLKQYQHDIRALVGRTLYLQGES-SHTQ 995
                  DER           +G LP       L  + +  +RA   R   L+ +      
Sbjct: 864  HGWSDDDER------RMACAAGWLPTGELGQALWGKLRGPVRAFAPRLFELRPDDVPEPL 917

Query: 996  DIDLLLSDSAATALVGRIDGVSAKGLVNYRPGTANARDLIRVYLRHLCLNASVSDNSDVE 1055
             +D+ L   A   + G +DGV+  GL  ++ G     DL   +LRHL LN S        
Sbjct: 918  PVDITL---AGVRVHGWLDGVTPAGLFGWKLGRLGEWDLPPFWLRHLLLNLS-------- 966

Query: 1056 RHEATPW-QRHSYLLDIGHFHAFAPITPEQALNQLSLWAEHYHQGQSQPLPFMPRTAFAY 1114
               ATP  +RHS +L         P+    A   L  W E Y     +PLP +PR++ A+
Sbjct: 967  ---ATPGIERHSLMLSPAGDWQLGPLA--NAAGLLEPWLEAYRCAIREPLPLLPRSSHAF 1021

Query: 1115 VEA---EGEHIEKLIA----AQPQWLDEQSN--LGEGQEAHYQRLFTFPDDFSEAGFGTI 1165
             +         E L      A+  WL  + +    EG++      F   D   +  F T+
Sbjct: 1022 AKGYRKPARGSEPLDCGRKRAREAWLGAEFSPIAAEGEDPWNMLAFRDRDPLDQR-FETL 1080

Query: 1166 ASTLLSPML 1174
            A  L+ P L
Sbjct: 1081 AQELIGPAL 1089