Pairwise Alignments

Query, 645 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella loihica PV-4

Subject, 642 a.a., lytic transglycosylase from Pseudomonas fluorescens FW300-N2E3

 Score =  312 bits (800), Expect = 3e-89
 Identities = 209/641 (32%), Positives = 304/641 (47%), Gaps = 11/641 (1%)

Query: 8   LFQAKRYLLLGLGALIPMTLSAAGLTPTQQRYLDAREALDKGQLDSYQALRKQLNGYPLT 67
           LF     LLL   A+   +  A  L+  +Q Y +A+ AL KG    Y    ++L+ YPL 
Sbjct: 5   LFSFLSCLLLSAAAV--QSAQAVDLSTQRQYYDEAKRALAKGDTGPYFRYSQELSDYPLE 62

Query: 68  PYLDYHAEIDSILDAPGAKALESMARFDGTPLYNSARHRYLENAGKQKHWQDFLAMSPEL 127
           PYL Y      +  A   +    +A     P  N  + R+L    ++  W  F+      
Sbjct: 63  PYLAYDELTARLKTASNDEIERFLAEHGDLPQANWMKLRWLRWLAERGDWATFVKYYDPK 122

Query: 128 PRSINLQCYYYRAQLSQGDKAAAFDGAEKLWLHGHSRPKECDPLFNAWEKAGNRSQSLLW 187
                L C   + Q+    K+  +  A+KLWL G S+P+ CD LF  W   G  ++   W
Sbjct: 123 LNFTELDCLNAQYQIGHNLKSEGYANADKLWLTGKSQPETCDSLFAQWAAEGQLTEQKRW 182

Query: 188 SRMLLAFNGGEYGLLKYLASKVTAHKKEAKQLLAVYQDPRSLRHTKRFKVKATIYGDIVD 247
            R+ LA +   Y L   L + +T      + L+ V Q P  L    RF        DIV 
Sbjct: 183 ERLKLAAHARNYALANSLINNMTTLASRGRLLVDVAQRPEMLDQPSRFTPADEAMSDIVS 242

Query: 248 AGLRRLARKDLVKAVSLFTKYEKAHRFSDYQGQKLARYL---MKRALVAQETELKAFVDS 304
            GLRR AR+D  +A++L   Y  +  FS  +   +AR +   + R   ++  ++    D 
Sbjct: 243 LGLRRFARQDPDRAMALLDSYAVSMHFSRDEKVAIAREIGLTLARRFDSRALDVMTKYD- 301

Query: 305 RLPKTDSDDLKALRLRWAIREADNQSLDNYLPLLSEAKRQKARWQYWIAR--RQMETGTE 362
             P+   + +   RLR  +R A           L +      RW+YW AR     +    
Sbjct: 302 --PELRDNTVSEWRLRLLLRLARWDEAYQLTSRLPQDLALTNRWRYWKARSLELAQPQNP 359

Query: 363 MAETALPSLSKQRNFYGFTAADLISTSINLAQIDTQLDESLTPQLTQDPGLARVEELLAL 422
            A+T   SL+++R+FYGF AAD   +  +L      L  +L  ++   PG+ R  E LA 
Sbjct: 360 EAQTLYKSLARERDFYGFLAADRSQSPYSLINKPLMLSPALINKVRNTPGIRRALEFLAR 419

Query: 423 DKKIDARAEWVLLLGRHTQNKQAQYALLAQRNQWHDLTVQASIQGQLWNDMTLRFPYAAD 482
            + +D R EW  +    ++++    A LA   +W+   ++   Q Q W+D+ +RFP A  
Sbjct: 420 GQIVDGRREWYHVSRHFSRDEMVAQAKLAYDLKWYFPAIRTISQAQYWDDLDIRFPMAHR 479

Query: 483 EAFKAASKSAKVDIDEIRAIARRESAFYPYATSGVGARGLMQLMPATAKETARKHGMKYS 542
           +     +K   +    + AI R+ESAF   A SGVGA GLMQLMP TAKETARK  +  +
Sbjct: 480 DTLVREAKVRGLHSSWVFAITRQESAFMDDARSGVGASGLMQLMPGTAKETARKFSIPLA 539

Query: 543 GSKSLYDVSLNTALGSRYYKSLLDKFDGNRVLATAAYNAGPHRVTRWLEQSQGKLDVYAF 602
             + + D   N  LG+ Y   +  +F+GNRVLATAAYNAGP RV +WL      L    +
Sbjct: 540 SPQQVLDPDKNIQLGAAYLSQVHSQFNGNRVLATAAYNAGPGRVRQWL-SGANHLSFDVW 598

Query: 603 IESIPFTETREYVQAVLSYRAIYQARQQKPVALFSAEELAF 643
           +ESIPF ETR+YVQ VLSY  IY  +   P  L    E  F
Sbjct: 599 VESIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYF 639