Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 815 a.a., Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  801 bits (2069), Expect = 0.0
 Identities = 409/807 (50%), Positives = 557/807 (69%), Gaps = 11/807 (1%)

Query: 4   LLWIFVMLFALGALAYLRVSLLTST-IIAAIVMALGT---ATASISPLAWLVFLAITLPL 59
           LLWI V++  +  LA+ R + L +  ++A  ++A+G    A   +  + WL++LA+ +P+
Sbjct: 3   LLWIVVLVVGIAWLAHRRTAPLPALGVVAVYLLAMGIFSHAPGWLLTVFWLLWLAVFVPV 62

Query: 60  NIGAFRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPNWKKLHNYPVA 119
            +   R+   T P+   ++ ++P MS TE++AI+AGT WW+ +LF+G+P+W KL  YP  
Sbjct: 63  MLPDLRRKHFTAPMFSWFQKVLPPMSQTERDAIDAGTVWWDGELFSGRPDWDKLLAYPKV 122

Query: 120 RLTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKKYGGLEF 179
           +LT EEQAFI+GP EE+C M++  ++   + DLP   W ++K +GFFA+II K++GG  F
Sbjct: 123 QLTEEEQAFIDGPTEELCAMVSDWEIGQAM-DLPPEAWAHMKAHGFFALIIPKEFGGKGF 181

Query: 180 SAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKGLEVPCF 239
           SAYA S+V  KLA  S +LASTV VPNSLGP ELL HYGT  Q++HYLPRLA+G ++PCF
Sbjct: 182 SAYAHSQVAMKLATRSGDLASTVMVPNSLGPAELLLHYGTDEQRNHYLPRLARGEDIPCF 241

Query: 240 ALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLAFKLQDP 299
           ALT P AGSDAGA+ D GI+CKGQWQGEEV+G++LTW KRYITL PVAT+LGLAFK  DP
Sbjct: 242 ALTGPLAGSDAGAMTDTGIICKGQWQGEEVIGLRLTWEKRYITLGPVATLLGLAFKAHDP 301

Query: 300 DKLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVPLDFIIGGPEM 359
           + LLG+KE+LGI+ ALIPTD PGVE GRRH PL   F NGP  G +VFVPL ++IGG  M
Sbjct: 302 EHLLGEKEDLGISLALIPTDTPGVEIGRRHLPLGAAFMNGPNSGKDVFVPLSYLIGGQPM 361

Query: 360 AGQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMA 419
            G+GW ML+ CLSVGR I+LP+   G  K  ++ TG YA++R QF +P+   EGI+E +A
Sbjct: 362 LGKGWMMLMNCLSVGRSISLPAVGTGAAKYTSLVTGQYAKVREQFNVPLSAFEGIQEALA 421

Query: 420 RIGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLG 479
           RIGGNA+LMD+   LT   +DLGEKPSV+SAI+KYHLT+R ++C+  AMD+HGGKG+ +G
Sbjct: 422 RIGGNAWLMDSARMLTANAVDLGEKPSVLSAILKYHLTERGRECIGHAMDVHGGKGIIMG 481

Query: 480 ENNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAFDPDMHKSLND 539
            NNYLGR +Q API ITVEGANIL+R+++I+GQGAIRCHP+VL EM  A   D  ++L +
Sbjct: 482 PNNYLGRNWQGAPIFITVEGANILSRNLMIFGQGAIRCHPFVLKEMALAGREDKQQALIE 541

Query: 540 FDSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNRFSANLALLSDLAM 599
           FDS L  HIGF  SN   +F L L   +F  +P    ++ Y++ +NR +A  A+L+DL+M
Sbjct: 542 FDSLLLKHIGFAVSNAASTFILNLGFGHFERAPGNGLSQGYFRALNRQAAAFAMLADLSM 601

Query: 600 ATLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWAVEDALYKLQD 659
             LGG LKR+ER+SARLGD+LS +YLASA LKRY D G       L +WA+E++L   + 
Sbjct: 602 MLLGGELKRRERLSARLGDVLSHMYLASAALKRYHDLGSPDHMSPLFRWAMEESLGHSER 661

Query: 660 SLDDLLNNFPMG-LGRVLRVILFPFGRPLKRPSDVLDHKVAKIMQTPCA--SRDRLGKGQ 716
           ++D++L+NFP   LG VLR ++FPFGR  K PSD LD +VA+++       + + L  G 
Sbjct: 662 AMDEILSNFPNRILGGVLRAVVFPFGRRHKGPSDRLDAEVAQVLGRAKGDPTLEELLAGC 721

Query: 717 FWTPSPFNAVGIQEQTFKDILACEPLHDKICKA--TGKRHPFMWLDKLAAEGKALGILSD 774
           +   S  + VG  +Q    + A  PLH K+  A  +G+  P    + +      +G+L  
Sbjct: 722 YRPQSADDPVGALQQAIDLLSAAYPLHKKLQVAIKSGQVKPDAG-EPVIDAALRIGVLQA 780

Query: 775 EEVALLERAEIGRMKSINVDDFDPAEL 801
           +E   L  AE  R K I+VDDFD  EL
Sbjct: 781 DEAQTLRTAEAARRKVIDVDDFDKEEL 807