Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 759 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  761 bits (1965), Expect = 0.0
 Identities = 394/756 (52%), Positives = 510/756 (67%), Gaps = 9/756 (1%)

Query: 47  LAWLVFLAITLPLNIGAFRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAG 106
           L  L+  A+ +   +   R   IT+P+   +K ++P +S TE+EA+EAG  WWE +LF G
Sbjct: 4   LLLLIIAAVIVLFAVKDLRMKFITQPVFAFFKRVLPPLSDTEREAMEAGDVWWEGELFRG 63

Query: 107 KPNWKKLHNYPVARLTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFF 166
           KPNW+ LH Y    L+AEE+ F++  V     M++   + H   DLP  +W Y K  GFF
Sbjct: 64  KPNWEALHAYGKPTLSAEEKEFLDNQVMTALSMIDDFDIVHNRKDLPPELWDYFKKEGFF 123

Query: 167 AMIIKKKYGGLEFSAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHY 226
           A+II KKYGG  FSAYA S ++ KLA  S   A TV VPNSLGPGELL HYGT  Q+D +
Sbjct: 124 ALIIPKKYGGKGFSAYANSTIVAKLASRSVSAAVTVMVPNSLGPGELLTHYGTKEQKDFW 183

Query: 227 LPRLAKGLEVPCFALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPV 286
           LP LAKG E+PCFALT PEAGSDAGAIPD G+V  G++ G EVLG++LTWNKRYITLAPV
Sbjct: 184 LPSLAKGEEIPCFALTGPEAGSDAGAIPDVGVVKNGEFNGNEVLGVELTWNKRYITLAPV 243

Query: 287 ATVLGLAFKLQDPDKLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEV 346
           ATVLGLAF+++DPD LLGDK+ +GITCALIPT  PGVE G RH PLN  F NG TRG++V
Sbjct: 244 ATVLGLAFQMKDPDGLLGDKKHIGITCALIPTSHPGVEIGNRHNPLNMAFMNGTTRGDKV 303

Query: 347 FVPLDFIIGGPEMAGQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKL 406
           F+PLD+IIGGP+ AG+GWRMLVECLS GRGI+LP+ +          T AY+ +R+QF +
Sbjct: 304 FIPLDWIIGGPQYAGKGWRMLVECLSAGRGISLPALATASGHVTTKTTTAYSYVRKQFGM 363

Query: 407 PIGKLEGIEEPMARIGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVID 466
            IG  EG++E +ARI GN Y ++A   LTTTGIDL  KPSV++AI KYH+T+  +  + D
Sbjct: 364 SIGHFEGVQEALARIIGNTYQLEAARRLTTTGIDLKVKPSVVTAIAKYHMTEMGRAVMDD 423

Query: 467 AMDIHGGKGVCLGENNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEME 526
           AMDI  GKG+ LG  NYLG  Y A PI+ITVEGANILTRS++I+GQGA RCHPYVLAEME
Sbjct: 424 AMDIQSGKGIQLGPKNYLGHAYMANPISITVEGANILTRSLMIFGQGATRCHPYVLAEME 483

Query: 527 AAFDPDMHKSLNDFDSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNR 586
           AA   D+  +L  FD  L GH+G+ T N + S +  LT+S F+ SP    TKRYYQHM R
Sbjct: 484 AAGMEDIDAALERFDDLLLGHMGYATRNALSSLFSALTASRFAQSPVSGDTKRYYQHMGR 543

Query: 587 FSANLALLSDLAMATLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLV 646
            SA LA+++D+AM  LGG LKR+E +SARLGD+LS+LYLASATLK ++D GRQ +DL  V
Sbjct: 544 MSAALAIMTDMAMLILGGELKRREMLSARLGDVLSELYLASATLKLFEDNGRQHDDLPTV 603

Query: 647 QWAVEDALYKLQDSLDDLLNNFPM-GLGRVLRVILFPFGRPLKRPSDVLDHKVAKIMQTP 705
            + ++  L K   +L+D L NFP+  +G +LR ++FP G   K PSD L  +V + M  P
Sbjct: 604 HYVMQTRLMKAAKALEDALRNFPLRPVGWLLRALVFPLGNHFKGPSDKLATQVVEAMLKP 663

Query: 706 CASRDRLGKGQFWTPS---PFNAVGIQEQTFKDILACEPLHDKICKA--TGKRHPFMWLD 760
             +R+RL    F  PS       +   E+ F     C  ++ K+  A   GK        
Sbjct: 664 GPARERL---TFLCPSFDGDKGGIAEVEEAFLAQYECRSIYKKLRSAQKEGKLKGKGVSA 720

Query: 761 KLAAEGKALGILSDEEVALLERAEIGRMKSINVDDF 796
            L ++    G++S EE   + +A+  R+ ++NVD+F
Sbjct: 721 ALLSQAVEQGVISQEEHDKVLKADELRLAAVNVDEF 756